Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., flagellar hook protein FlgE from Pseudomonas simiae WCS417

 Score =  207 bits (528), Expect = 4e-58
 Identities = 149/450 (33%), Positives = 221/450 (49%), Gaps = 39/450 (8%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63
           + LSGL AA   L+ T NNIAN  T GFK SRAEF D+Y+ S     + + G GV  A V
Sbjct: 5   IGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADIYAASKLGTGQNSIGNGVNLAAV 64

Query: 64  AQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVT-AND 122
           +QQF +G    +   LD+ I G GFF     +      E TR+GAF  DK+ ++      
Sbjct: 65  SQQFTQGDVNGSGGILDMAIQGGGFFV---QKGSDGSLEYTRSGAFRADKDGYITNNTGT 121

Query: 123 EFLLGYEVNPD----TGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPAL- 177
             L GY  + D     G +   +    N+PP     K +  +D  +NL ++  + D    
Sbjct: 122 SRLQGYAADADGKIIKGGLTDLQLNLSNLPP-----KASTKVDSTSNLNSSEPVIDQTAK 176

Query: 178 -FDITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINVV 236
            F+  D  T+    S+T+YDS G  + +  Y +K     N W  Y T+ D  G  P    
Sbjct: 177 PFNPNDTSTFTTQYSTTLYDSQGNAHPMVQYLVK--TDGNKWNAY-TLID--GRNP---- 227

Query: 237 GGDAASPTGH-----VGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDL-------NG 284
             + ++PTG      V   + F+ +G L+S+  G          G  P  +       NG
Sbjct: 228 --NGSAPTGTPSTPPVPSALTFDGNGKLTSVVTGGVSDKTLTITGWVPGTVTDGVWKANG 285

Query: 285 ADVNQT-LSFSLDSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTL 343
           A+ N T ++ ++ + TQ+ +         DG  TG +T +  D NG + AT+SN  +  +
Sbjct: 286 ANANPTGIAVNMANITQYNSATYRNPPVTDGYATGQITGLKIDGNGVLFATFSNQQSKAI 345

Query: 344 GRVALVRVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQEL 403
           G+++L    NEQGL   GGT W  T  SG   +     G+ GSI   SLE SN+++T EL
Sbjct: 346 GQISLASFNNEQGLQPAGGTSWRETFASGQPGYDTPQAGTLGSIVANSLENSNVNLTNEL 405

Query: 404 VDLISAQRNFQANSRALEVHNGLQQNILQI 433
           VDLI AQ N+QAN++ +   + + Q I+Q+
Sbjct: 406 VDLIKAQSNYQANAKTISTQSTIMQTIIQM 435