Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., Flagellar hook protein FlgE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  179 bits (454), Expect = 1e-49
 Identities = 138/435 (31%), Positives = 206/435 (47%), Gaps = 50/435 (11%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQ--GVQAA 61
           ++L G++A    L   SNNIANA T+GFK SRA F  +Y+           GQ  GV+  
Sbjct: 5   IALGGVNAINTQLEAISNNIANAGTYGFKSSRANFASMYAD----------GQPIGVEVG 54

Query: 62  KVAQQFH-EGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTA 120
            ++Q     G ++ T   +D  I G GFF V KD     +   TR G F  DK+ ++  +
Sbjct: 55  SMSQTIGTSGGALNTGRSMDAAIQGKGFF-VTKD--TNGETLFTRVGIFGADKDGYVTDS 111

Query: 121 NDEFLLGYEVNPDT---GDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPAL 177
               + GY   P +   G +   + +   +P Q      ++ +D   NL A+      A 
Sbjct: 112 FGRRVQGYAAIPGSTALGALGDMQIEKGQLPAQ-----ASSTLDYVGNLSADWPNPAVAP 166

Query: 178 FDITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINVVG 237
           F   DP++YN +  S +YDS G  + +T Y+++     N    +YT              
Sbjct: 167 FSAADPQSYNGSMVSVVYDSQGTKHTVTQYFVR--TNPNEITVHYTFDG----------- 213

Query: 238 GDAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDLNGADVNQTLSFSLDS 297
             AA P G     ++F+  G L  L    P VT+ L     PV    A +   L+ + + 
Sbjct: 214 --AALPAGSQT-VLQFSTAGQL--LTPAAP-VTKNL-----PVPATVAPI--ALAVNYNG 260

Query: 298 ATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGL 357
            TQFA     T    +G  +G    +  D++GSVLA YSNG+   +G +AL    NE GL
Sbjct: 261 TTQFAGQATTTVNASNGYASGSFVGVALDKDGSVLAQYSNGLKQRVGTIALANFPNEDGL 320

Query: 358 DKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANS 417
                T W  +  SG  ++     G  G+IS GSLEQSN+D+T ELV L++AQRN+QAN+
Sbjct: 321 VPVSDTSWAVSNASGDPLYDVPGAGQAGTISPGSLEQSNVDLTGELVGLMTAQRNYQANT 380

Query: 418 RALEVHNGLQQNILQ 432
           +       + Q ++Q
Sbjct: 381 KVFSTQQAMTQALMQ 395