Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., flagellar hook protein from Escherichia coli BL21

 Score =  208 bits (529), Expect = 3e-58
 Identities = 143/439 (32%), Positives = 227/439 (51%), Gaps = 52/439 (11%)

Query: 5   SLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKVA 64
           ++SGL+AA  +L+   NNIAN+ T+GFK   A F D+++ S         G GV+ A + 
Sbjct: 6   AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV-------GLGVKVAGIT 58

Query: 65  QQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNEL--TRNGAFHLDKNSFMVTAND 122
           Q F +G++  T   LD+ I+  GFF     RLV     +  +RNG F LD+N  +V    
Sbjct: 59  QDFTDGTTTNTGRGLDVAISQNGFF-----RLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113

Query: 123 EFLLGYEVNPDTGDVLSYE----PKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALF 178
             L GY   P TG   + +    P  I+IP      K T    +  NL ++  L     F
Sbjct: 114 LQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170

Query: 179 DITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINVVGG 238
             ++ ++YN+  S T++DS G  + ++ Y++K  +  N WQ Y                 
Sbjct: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--NNWQVYTQ--------------- 213

Query: 239 DAASPTGHVGHTMR--FNNDGTLSSLNNGQPIVTEPLGGGANPVDLNGAD-VNQTLSFSL 295
           D++ PTG     M+  FN +G L+S     P  TE +  GA    +NGAD    +LSF L
Sbjct: 214 DSSDPTGTAEPAMKLVFNANGVLTS----NP--TENITTGA----INGADPATFSLSF-L 262

Query: 296 DSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQ 355
           +S  Q      +    Q+G   G L     +++G+V+  YSN     LG++ L   AN +
Sbjct: 263 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 322

Query: 356 GLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQA 415
           GL  +G   W ATQ SG  + G +  G+FG+++NG+LE SN+D+++ELV++I AQRN+Q+
Sbjct: 323 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 382

Query: 416 NSRALEVHNGLQQNILQIR 434
           N++ ++  + +   ++ +R
Sbjct: 383 NAQTIKTQDQILNTLVNLR 401