Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Flagellar hook protein FlgE from Alteromonas macleodii MIT1002

 Score =  344 bits (882), Expect = 4e-99
 Identities = 204/463 (44%), Positives = 272/463 (58%), Gaps = 38/463 (8%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63
           ++LSG+SAAQ DL+ T+NNIAN NT GFKESRAEFGDVY+ SL +  KT  G GV   +V
Sbjct: 5   IALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLSGGKTKVGDGVLTQEV 64

Query: 64  AQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTANDE 123
           AQQF +GS  +TN  LDL I G GFFA   + +  +    TR G F LD ++F+V +N +
Sbjct: 65  AQQFSQGSLQFTNTSLDLAITGNGFFATVPE-ITSRDFSFTRAGQFKLDSDNFVVNSNGD 123

Query: 124 FLLGYEVNPD--TGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDIT 181
            LLG+ VN D  +  V     +P+ IP   G P QT  +D+  NLPA     DP  FD  
Sbjct: 124 NLLGFPVNSDGTSASVALSTTEPVRIPDSSGSPAQTTEVDIRMNLPAGDAALDPQDFDPE 183

Query: 182 DPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQA--NTW-------QTYYTVTDKTGEKP 232
           DP TYN  TS T+YDS+G  + +T Y++KD      N W        T   +TD  G   
Sbjct: 184 DPLTYNAATSVTVYDSLGDSHVMTYYFIKDATPGVDNEWYVATAIDDTLVDMTDSAGNDT 243

Query: 233 -----INVVGGDAASPTGHVGHTMRFNNDGTLSSLN--NGQPIV-----TEPLGGGANPV 280
                +N VGG+  +        + F+  G  + +   +G P +     TE LG G   +
Sbjct: 244 DPATAVNSVGGNTGNAV--TASKLIFSQGGDFAGMETPDGLPTLDFKMQTEALGAG---I 298

Query: 281 DLNGADVNQTLS--FSLD-------SATQFAAPFELTKFDQDGATTGFLTKIDFDENGSV 331
             NG+D  Q +S  F+LD         TQFA+ FE+T  +QDG   G LT ID   +G V
Sbjct: 299 LANGSDPTQQISIDFNLDVNNATPNEPTQFASAFEVTSLEQDGLPVGRLTGIDIGPDGLV 358

Query: 332 LATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGS 391
            AT+SNG +  + RVALVR +NEQGL ++  TQW  +  SG  + GE+  G+FG I++ +
Sbjct: 359 RATFSNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSA 418

Query: 392 LEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQIR 434
           LEQ+N+++T EL+D+I AQRNFQANSRALEV+N L Q IL IR
Sbjct: 419 LEQANVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNIR 461