Pairwise Alignments

Query, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., Flagellar basal-body rod protein FlgF from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  172 bits (435), Expect = 7e-48
 Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 6/247 (2%)

Query: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60
           MD  ++ AMSGA++ ++  Q+RANNLAN  T GFRAD+A + +M   G G   R  S   
Sbjct: 1   MDALIYTAMSGAERTLREQQVRANNLANADTPGFRADVAFSTAMATPGYGYDDRHMSQLN 60

Query: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120
             G +   G + +TGRDLD+ I G+G+ +V  +  +E  TR+G   +D  G  L  NG P
Sbjct: 61  ADGVSARHGVLKSTGRDLDVAITGEGYYAVQYRGAQEAYTRSGQFTVDADG-TLTVNGRP 119

Query: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180
           V+G+ G PI LP    +V+I GDGT+S++P G   + ++ VDRIK VR     + K+  G
Sbjct: 120 VVGD-GGPIVLPA-FTRVDIAGDGTVSIQPPG--QEDLQPVDRIKTVRPLGGEVTKNEAG 175

Query: 181 LFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDK 240
           L  A D      AD +V + +G LEGSNV+A+ EM + + L R FE+Q+K+  +AE + +
Sbjct: 176 LIVARD-GQPLPADDTVTMRSGHLEGSNVSAVEEMVATMTLSRDFEVQMKLFGSAERLSE 234

Query: 241 ASDSLLR 247
           A + L+R
Sbjct: 235 AGNRLVR 241