Pairwise Alignments

Query, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., flagellar basal-body rod protein FlgF from Escherichia coli ECRC62

 Score =  174 bits (442), Expect = 1e-48
 Identities = 97/254 (38%), Positives = 148/254 (58%), Gaps = 8/254 (3%)

Query: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60
           MD A++ AM  A Q +    + A+NLAN ST GFRA L   R++   G  LP+R      
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS 60

Query: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120
            PG +   G +  T R LD+ +Q DGW++V    G EG TRNG++++D TG  L   GHP
Sbjct: 61  TPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTG-QLTIQGHP 119

Query: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180
           V+GE G PI +P    ++ I  DGTIS    G PA+ +  V R+KLV+     + +  +G
Sbjct: 120 VIGEAG-PIAVPEGA-EITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDG 177

Query: 181 LFRATDPNTQ-----FEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTA 235
           +FR +  +        +AD ++++++G LEGSNVNA+  M+ +I   R+FEMQ+K++S+ 
Sbjct: 178 IFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSV 237

Query: 236 EEMDKASDSLLRSS 249
           ++    ++ LL  S
Sbjct: 238 DDNAGRANQLLSMS 251