Pairwise Alignments

Query, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., flagellar basal-body rod protein FlgF from Escherichia coli ECRC101

 Score =  174 bits (441), Expect = 2e-48
 Identities = 99/255 (38%), Positives = 149/255 (58%), Gaps = 10/255 (3%)

Query: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60
           MD A++ AM  A Q +    + A+NLAN ST GFRA L   R++   G  LP+R      
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS 60

Query: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120
            PG +   G +  T R LD+ +Q DGW++V    G EG TRNG++++D TG  L   GHP
Sbjct: 61  TPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTG-QLTIQGHP 119

Query: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180
           V+GE G PI +P    ++ I  DGTIS    G PA+ +  V R+KLV+     + +  +G
Sbjct: 120 VIGEAG-PIAVPEGA-EITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDG 177

Query: 181 LFRATDPNTQ------FEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMST 234
           +FR +   TQ       +AD ++++++G LEGSNVNA+  M+ +I   R+FEMQ+K++S+
Sbjct: 178 IFRLS-AETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 235 AEEMDKASDSLLRSS 249
            ++    ++ LL  S
Sbjct: 237 VDDNAGRANQLLSMS 251