Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., Flagellar L-ring protein FlgH from Pseudomonas sp. S08-1

 Score =  167 bits (423), Expect = 2e-46
 Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 13/208 (6%)

Query: 62  PVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAA 121
           P   DP +AP+ P+  P   A   GS++     +++YDD K   VGDIIT+ L+E T+A+
Sbjct: 24  PKPDDPYYAPVLPR-TPLPAAQTNGSIYQAGFETNLYDDRKAYRVGDIITINLSERTQAS 82

Query: 122 KSADADLNKKNDASMDPLAVGGKDLTIGDYNFSY-ALKNDN-----------KFSGSAAA 169
           K A + ++K + A++   ++ G  ++I + + S   LK +N              G + A
Sbjct: 83  KKAGSSMSKDSSANLGLTSLFGGGVSIDNPSSSLNPLKAENLSLDVGYEGTRDTDGESEA 142

Query: 170 NQSNSMSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASN 229
           +QSNS+SGSITV V EVL NG L +RGEKWLTLNTGDE +R++G IR DDI  DNT++S 
Sbjct: 143 DQSNSLSGSITVTVAEVLPNGILAVRGEKWLTLNTGDELVRIAGMIRADDIATDNTVSST 202

Query: 230 RISNARIQYSGTGTNQDMQEPGFLARFF 257
           R++NARI YSGTG   D  +PG+  RFF
Sbjct: 203 RVANARITYSGTGAFADASQPGWFDRFF 230