Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Flagellar L-ring protein from Pseudomonas sp. RS175

 Score =  172 bits (436), Expect = 6e-48
 Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 7/202 (3%)

Query: 62  PVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAA 121
           P   DP +AP+ P+  P   AA  GS++      ++Y D K   VGDIIT+TLNE T+A+
Sbjct: 24  PKPNDPYYAPVLPR-TPLPAAANNGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTQAS 82

Query: 122 KSADADLNKKNDASMDPLAVGGKDLTIG------DYNFSYALKNDNKFSGSAAANQSNSM 175
           K+A++ ++K ++ S+   ++ G  LT        D + +     D    G + + QSNS+
Sbjct: 83  KNANSQIDKTSETSVGLTSLFGSSLTTNNPIGSNDLSLNAGYGADRATKGDSKSGQSNSL 142

Query: 176 SGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNAR 235
           +GSITV V +VL NG +V+RGEKWLTLNTGDE +R++G +R DDI  DNT++S R+++AR
Sbjct: 143 TGSITVTVADVLPNGIIVVRGEKWLTLNTGDELVRIAGMVRADDIATDNTVSSTRVADAR 202

Query: 236 IQYSGTGTNQDMQEPGFLARFF 257
           I YSGTG   D  +PG+  RFF
Sbjct: 203 ITYSGTGAFADASQPGWFDRFF 224