Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., flagellar basal body L-ring protein FlgH from Magnetospirillum magneticum AMB-1

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 17/227 (7%)

Query: 46  SESNSG-LTDALRNRTDPVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPR 104
           SE  SG  T  ++N T      P   P+     P   A    SL+    + + + D + +
Sbjct: 37  SEVGSGPQTSPIQNPTQKSGYQPVSMPMPQPSAPPQNA---NSLWR-PGARAFFKDQRAK 92

Query: 105 GVGDIITVTLNESTKAAKSADADLNKKNDASMDPLAVGGKDLTIG-DYNFSYALKNDNKF 163
            VGDI+TV ++ +  A  +     ++           G     +G +   S  L N N  
Sbjct: 93  DVGDILTVAVSIADSATLTTGLTNSRTGSEKAGSGTTGSPISAMGFEQQLSKLLPNINLA 152

Query: 164 S------GSAAANQSN-----SMSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLS 212
           S       SA  N  N     S++ S+   + +VL NGNLVI G +   +N     + + 
Sbjct: 153 SLADLSSTSAVTNSGNTTRTESITMSMAAVITQVLPNGNLVISGRQEFRVNYEMRELSIQ 212

Query: 213 GTIRPDDIDFDNTIASNRISNARIQYSGTGTNQDMQEPGFLARFFNV 259
           G IRP+DI   N+++S +I+ AR+ Y G G   D+ +P +  + F++
Sbjct: 213 GIIRPEDISSSNSVSSEKIAEARVYYGGRGMVSDLTQPRYGQQIFDI 259