Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., flagellar L-ring protein precursor H (NCBI) from Escherichia coli BW25113

 Score =  121 bits (304), Expect = 1e-32
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 38/258 (14%)

Query: 2   AAMKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTD 61
           AA    ++S L++ L+GC+     I S   +QG T+   V G    +N            
Sbjct: 5   AAHTYAISSLLVLSLTGCAW----IPSTPLVQGATSAQPVPGPTPVANGS---------- 50

Query: 62  PVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAA 121
                     I    +P +Y  +            +++D +PR +GD +T+ L E+  A+
Sbjct: 51  ----------IFQSAQPINYGYQP-----------LFEDRRPRNIGDTLTIVLQENVSAS 89

Query: 122 KSADADLNK--KNDASMDPLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSI 179
           KS+ A+ ++  K +   D +    + L  G+          N F+G   AN SN+ SG++
Sbjct: 90  KSSSANASRDGKTNFGFDTVPRYLQGL-FGNARADVEASGGNTFNGKGGANASNTFSGTL 148

Query: 180 TVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYS 239
           TV V +VL NGNL + GEK + +N G E+IR SG + P  I   NT+ S ++++ARI+Y 
Sbjct: 149 TVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYV 208

Query: 240 GTGTNQDMQEPGFLARFF 257
           G G   + Q  G+L RFF
Sbjct: 209 GNGYINEAQNMGWLQRFF 226