Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., flagellar basal body L-ring protein from Alteromonas macleodii MIT1002

 Score =  147 bits (372), Expect = 2e-40
 Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)

Query: 61  DPVAGDPAWAPIHPKGKPEHYA-AETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTK 119
           +P  GDP ++P  P+ +P       TGSLFN   S  +Y+      VGD+I V L E T+
Sbjct: 50  EPSPGDPRYSP--PRMEPTSTLHVPTGSLFNPEHSVGLYERHASFKVGDMILVKLEEQTQ 107

Query: 120 AAKSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSI 179
           + KS D + +K     + P+ +    + I + +     + D++F+ SA   QSNSMSGSI
Sbjct: 108 SEKSLDFNTDKNTSFDLSPVTLKVGGIRIDEDDVEVEHEQDSEFASSAKTKQSNSMSGSI 167

Query: 180 TVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYS 239
           TV V  +   GNL++ GEKW+T+N G EYIR SG +R  D+D  NT+ S+++ NA I+YS
Sbjct: 168 TVYVTGITPAGNLLVTGEKWITMNRGKEYIRFSGEVRKKDVDESNTVLSSKVGNALIEYS 227

Query: 240 GTGTNQDMQEPGFLARFFNV 259
           GTG  QD Q+   + + F++
Sbjct: 228 GTGELQDNQQRTVIGKLFSI 247