Pairwise Alignments

Query, 361 a.a., flagellar P-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., flagellar basal body P-ring protein FlgI from Escherichia coli ECRC62

 Score =  336 bits (861), Expect = 7e-97
 Identities = 173/359 (48%), Positives = 249/359 (69%), Gaps = 5/359 (1%)

Query: 7   LLMLLLASSAQAARIKDVAQVAGVRNNQLVGYGLVTGLPGTGEST---PFTDQSFNAMLQ 63
           L++LL+ ++AQA RI+D+  V GVR N L+GYGLV GL GTG+ T   PFT Q+ N ML 
Sbjct: 8   LILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNMLS 67

Query: 64  SFGIQLPPGTKPKTKNVAAVIVTADLPAFSKQGQTIDITVSSIGSAKSLRGGTLMQTFLK 123
             GI +P GT  + KNVAAV+VTA LP F +QGQTID+ VSS+G+AKSLRGGTL+ T LK
Sbjct: 68  QLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMTPLK 127

Query: 124 GLDGQVYAVAQGNLVVSGFSATGADGSKIVGNNPTVGMISSGAIVEREVPNPFGRGDYIT 183
           G+D QVYA+AQGN++V G  A+ A GS +  N    G I++GA++ERE+P+ FG G+ + 
Sbjct: 128 GVDSQVYALAQGNILVGGAGAS-AGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNTLN 186

Query: 184 FNLFESDFTTAQRLADAVNQFLGPQMASAVDAASIKVRAPRDLSQRVAFLSAIENLEFNP 243
             L + DF+ AQ++AD +N+  G   A+A+DA +I+VR P   S +V FL+ I+N++ N 
Sbjct: 187 LQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQVNV 246

Query: 244 ADSAAKIIVNSRTGTIVVGQNVRLKPAAVTHGGMTVAIKENLNVSQPNA-LGGGQTVVVP 302
               AK+++NSRTG++V+ + V L   AV  G ++V +    NVSQP+   GGGQTVV P
Sbjct: 247 TPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGGQTVVTP 306

Query: 303 NTEIEVTEKQGKMFKLEPGVTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII 361
            T+I++ +  G +  +    +L+++VRA+N +GA P DLM+ILQ+++ AG +  +L II
Sbjct: 307 QTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKLEII 365