Pairwise Alignments

Query, 361 a.a., flagellar P-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., putative flagellar basal body protein from Escherichia coli BL21

 Score =  336 bits (862), Expect = 5e-97
 Identities = 176/366 (48%), Positives = 253/366 (69%), Gaps = 6/366 (1%)

Query: 1   MRKF-TILLMLLLASSAQAARIKDVAQVAGVRNNQLVGYGLVTGLPGTGEST---PFTDQ 56
           M KF + L++LL+ ++AQA RI+D+  V GVR N L+GYGLV GL GTG+ T   PFT Q
Sbjct: 1   MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQ 60

Query: 57  SFNAMLQSFGIQLPPGTKPKTKNVAAVIVTADLPAFSKQGQTIDITVSSIGSAKSLRGGT 116
           + N ML   GI +P GT  + KNVAAV+VTA LP F +QGQTID+ VSS+G+AKSLRGGT
Sbjct: 61  TLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGT 120

Query: 117 LMQTFLKGLDGQVYAVAQGNLVVSGFSATGADGSKIVGNNPTVGMISSGAIVEREVPNPF 176
           L+ T LKG+D QVYA+AQGN++V G  A+ A GS +  N    G I++GA++ERE+P+ F
Sbjct: 121 LLMTPLKGVDSQVYALAQGNILVGGAGAS-AGGSSVQVNQLNGGRITNGAVIERELPSQF 179

Query: 177 GRGDYITFNLFESDFTTAQRLADAVNQFLGPQMASAVDAASIKVRAPRDLSQRVAFLSAI 236
           G G+ +   L + DF+ AQ++AD +N+  G   A+A+DA +I+VR P   S +V FL+ I
Sbjct: 180 GVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADI 239

Query: 237 ENLEFNPADSAAKIIVNSRTGTIVVGQNVRLKPAAVTHGGMTVAIKENLNVSQPNA-LGG 295
           +N++ N     AK+++NSRTG++V+ + V L   AV  G ++V +    NVSQP+   GG
Sbjct: 240 QNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGG 299

Query: 296 GQTVVVPNTEIEVTEKQGKMFKLEPGVTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIE 355
           GQTVV P T+I++ +  G +  +    +L+++VRA+N +GA P DLM+ILQ+++ AG + 
Sbjct: 300 GQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLR 359

Query: 356 GQLIII 361
            +L II
Sbjct: 360 AKLEII 365