Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Flagellar protein FlgJ [peptidoglycan hydrolase] from Variovorax sp. SCN45

 Score =  180 bits (456), Expect = 5e-50
 Identities = 116/316 (36%), Positives = 170/316 (53%), Gaps = 28/316 (8%)

Query: 7   DIGFIQDIAGLDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDFKSDL 66
           D  F  D+ G+D LR+      E      L   +RQFE++F +M+LKSMR+A     S L
Sbjct: 26  DQRFALDVQGVDALRRTVRASPEEG----LQQVSRQFEAMFMNMVLKSMREATPS--SGL 79

Query: 67  MSSQNEDLYRQMLDEQMASEFSSSGSLGLADMIVAQLS----TGQTASEQKGEDGFQEAM 122
           + SQN+ +Y+ M D+Q+A   S  G +GLA+ ++ QL     +G   +E   E G +  +
Sbjct: 80  LDSQNQKIYQSMFDQQLAQNLSGRG-VGLAEAMLEQLRRTLPSGPPDAEADAEIGMRPML 138

Query: 123 RRVEHARKTASERSNEDLVAA------------VYPL---RKTQAVQSTQFDSRHSFVTK 167
                     S R+   + +A            VY     R+  A  ++       FV +
Sbjct: 139 LEPRSTGLPFSPRAGIPIGSAPSGRVSTAADLGVYQYNGDRRAPAANASLQGQVDDFVGR 198

Query: 168 LKPYADKAARMLGVDSSLLIAQAALETGWGQKMVKNARGNSN-NLFNIKADRSWQGDKVA 226
           +   A  A+   GV + L++AQAALE+GWG++ ++   G  + NLF IKADRSW+G  V 
Sbjct: 199 MGASAQAASTASGVPAPLILAQAALESGWGKREIRADDGTQSFNLFGIKADRSWKGPTVE 258

Query: 227 TQTLEYHNNVPVVEKAAFRSYASFDESFNDYVRFLENNPRYTNALDHGGNSERFIHGIHR 286
           T T EY +  P   +A FR+YAS+DE+F DY RF+  NPRY N L      E   HG+ R
Sbjct: 259 TTTTEYVDGEPQKVRAKFRAYASYDEAFTDYARFITRNPRYANVLATDDPHEA-AHGLQR 317

Query: 287 AGYATDPQYADKVLRV 302
           AGYATDP+Y +K++R+
Sbjct: 318 AGYATDPKYGEKLVRI 333