Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., flagellar rod assembly protein/muramidase FlgJ from Pseudomonas sp. S08-1

 Score =  171 bits (433), Expect = 3e-47
 Identities = 116/356 (32%), Positives = 178/356 (50%), Gaps = 69/356 (19%)

Query: 17  LDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDF-KSDLMSSQNEDLY 75
           L++L Q  V GD    +S +   A++FES+F + M+KSMR AN  F + + M+S     Y
Sbjct: 17  LNRLNQFKVGGDS---ESNIKKVAQEFESLFLNEMMKSMRKANEVFGEGNFMNSNESKTY 73

Query: 76  RQMLDEQMASEFSSS-GSLGLADMI---VAQLSTGQT------------------ASEQK 113
           + M D+Q+A   S+S G +GLA ++   ++Q+ +G                    A +  
Sbjct: 74  QDMHDQQLAVTLSTSNGGIGLASVLERQLSQMKSGPKRVNPFAQVEAPNATARAGAFKPA 133

Query: 114 GEDGF--QEAMRRVEHARKTASERSNEDLVAAVYP------------------------- 146
           GE G   ++  + +   R +   +  + L+A + P                         
Sbjct: 134 GEGGVASRDDSQLLNQRRLSLPSKLTDRLLAGIVPAAGEAQPLAGSDWVPAHATAVAGDK 193

Query: 147 ---LRKTQAVQSTQ------------FDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAA 191
              L  + A+   +            F S   F+  + P A++AA+ +GVD+  L+AQAA
Sbjct: 194 PLSLDDSDAISGRRVAQPPLAKGKSAFASAAEFIETMLPMAEEAAQKIGVDARYLVAQAA 253

Query: 192 LETGWGQKMVKNARGNSN-NLFNIKADRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASF 250
           LETGWG+ +++ A G+S+ NLF IKA   W+GD     T EY     V E A+FR+Y S+
Sbjct: 254 LETGWGKSIIRQADGSSSHNLFGIKAHGGWEGDSARVLTTEYKGGEAVKESASFRAYDSY 313

Query: 251 DESFNDYVRFLENNPRYTNALDHGGNSERFIHGIHRAGYATDPQYADKVLRVKAQI 306
            +SFNDYV FL+ N RY  AL      ERF+  +  AGYATDPQYA K+ ++  Q+
Sbjct: 314 QQSFNDYVSFLQGNGRYQEALAVTDKPERFVRELQEAGYATDPQYARKIAQIARQM 369