Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  135 bits (339), Expect = 2e-36
 Identities = 67/150 (44%), Positives = 93/150 (62%), Gaps = 1/150 (0%)

Query: 158 FDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAALETGWGQKMVKNARGNSN-NLFNIKA 216
           F     FV  + P A +AA  +GVD   L+AQAALETGWG+ +++   G+S+ NLF IKA
Sbjct: 274 FRDADEFVNAMLPMAKEAADRIGVDPRYLVAQAALETGWGKSVMRQPDGSSSHNLFGIKA 333

Query: 217 DRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASFDESFNDYVRFLENNPRYTNALDHGGN 276
            ++W GD     T E+ N   V E A FRSYAS+ +SF+D V  L++N RY + L    N
Sbjct: 334 SKNWTGDSARAITSEFRNGEMVKETAEFRSYASYRDSFHDLVNLLQSNSRYQDVLKSADN 393

Query: 277 SERFIHGIHRAGYATDPQYADKVLRVKAQI 306
            E+F+  + +AGYATDP YA K+  +  Q+
Sbjct: 394 PEQFVRELQKAGYATDPNYASKISNIARQM 423



 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 9/124 (7%)

Query: 5   SNDIGFIQDIAGLDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDF-K 63
           S D     D+  L++L+    N D N     L   A++FES+F   MLKSMR A     K
Sbjct: 10  SGDSASYSDLNRLNQLKVGDKNSDGN-----LRKVAQEFESLFIGEMLKSMRSATEVLGK 64

Query: 64  SDLMSSQNEDLYRQMLDEQMASEFS-SSGSLGLADMIVAQLSTGQTASEQKGEDGFQEAM 122
            + M++     Y++M D+Q+A   S   G +GLAD+++ Q+S  ++ +   GE     A 
Sbjct: 65  DNPMNTPEAKQYQEMYDQQLAVSMSREGGGIGLADVLLRQMSKNKSLA--SGEAATLSAA 122

Query: 123 RRVE 126
           ++ E
Sbjct: 123 KQQE 126