Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., Flagellar hook-associated protein FlgK from Pseudomonas putida KT2440

 Score =  196 bits (498), Expect = 3e-54
 Identities = 172/686 (25%), Positives = 303/686 (44%), Gaps = 77/686 (11%)

Query: 3   SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVE 62
           S L+++G   +  +Q  L+ T +NI+N  T GYSRQ  +Q        G    G G  + 
Sbjct: 2   SSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTLA 61

Query: 63  NVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVKSL 122
           +VRR +  +   +L  A++  A     ++ +  + KLL+      I   L  +F ++++ 
Sbjct: 62  DVRRIYSSYLDNQLQTATSLQADSVTFQDQITSVDKLLAD-RDTGISSVLTAFFSALQTA 120

Query: 123 ADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRDLQ 182
           A  P D+ +R+++L +++ +S   N     +  Q    N  L     ++N+L   I +  
Sbjct: 121 AAKPGDVASRQLLLTQAQTLSNRFNAVSTQLTQQNATINSQLDTMAGQVNKLTANIAEYN 180

Query: 183 RLMMRVPGPHN---DLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTEA 239
           + +       N    L+D   + V +L++   VTV +R     +++++G+G +LV+GT+A
Sbjct: 181 KQITAASASGNTPNSLLDARSEAVRQLNELVGVTVQERDGN--YDVYLGSGQSLVTGTKA 238

Query: 240 SQLRVIDGFPDTQQHRLAMVEGKALKAISARDIGGKMEAILDMRDEHIPYLMDEVGRLAL 299
           + L V  G  D  Q  L +        +++   GG +  +L  R + +   M+E+GR+AL
Sbjct: 239 NTLSVEPGVADKSQVALRINYDSFSSDVTSVVSGGAIGGLLRYRQDVLTPSMNELGRVAL 298

Query: 300 SFSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRVVTNSNSKA---DMAVFIEDVSQ 356
             +  +N+   QGLD  G  GS+LF+ +N       R + +SN+ A   ++ V I +   
Sbjct: 299 VVADSINSQLGQGLDANGQFGSSLFSSINSATAIAQRSLASSNNSAGSGNLDVTIANSGA 358

Query: 357 LKGGEYSMQY-NGSEFVVTLPSGQQTVLPVVKGN--VYVDGLRVEVRNPP-QVGERILVR 412
           L   +Y +++ + S++ V    G       +  +    +DG  + ++      G+   V 
Sbjct: 359 LTTYDYEVKFTSASQYSVRRSDGTDMGSFDLNADPAPVIDGFSLALKGGGLAAGDSFKVI 418

Query: 413 PTRNGAAAIRLATEDATKIA------------------------AQSFE----ASTTFAQ 444
           PTR  A +I     DA K+A                         +S +    A T   Q
Sbjct: 419 PTRAAAGSITTTLTDANKLAFAGPISAAAGSGNSGTGTITQPTLGESLDIYGGADTALIQ 478

Query: 445 ------------------GKAKFKILQAGDVREFEVIVSPTGDQ-----FAVTDTKGNIL 481
                             G   +K+  A   +     V P  D        + D  G+ +
Sbjct: 479 QSIRDSMPVRVVFDAASGGSQGYKLFDAKGTQIGTGSVVPGQDNKLSIAVPMLDAAGDPI 538

Query: 482 LQPQPYPPTGPVTVLGTTFELTEGALP--NDKFTANL-VPSEGDNGNLRKMINIQTAKRM 538
           L     P T  V       E T G  P  ND FT +     + DN N   ++++QT   +
Sbjct: 539 LDGSGNPRTFAV-------ETTIGGSPAANDSFTLSFNADGKADNRNANALLDLQTKSTV 591

Query: 539 NDNEST---IIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQSRIASISGVNLDEEAAN 595
             N  T       Y +L   VG K +  T  T   +   ++A    +++SGVNLD+EAA+
Sbjct: 592 GTNSGTGTSFTSAYASLVERVGAKASQATIDTTATQAVLKSATESRSAVSGVNLDDEAAS 651

Query: 596 MMKFQQAYMASSRIIQASNDTFNTIL 621
           ++KFQ  Y ASS+II+A+ +TF+T++
Sbjct: 652 LVKFQHYYTASSQIIKAAQETFSTLI 677