Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., Flagellar hook-associated protein FlgK from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  196 bits (498), Expect = 3e-54
 Identities = 169/642 (26%), Positives = 296/642 (46%), Gaps = 39/642 (6%)

Query: 6   LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65
           LN+G +++      L   G+NI+NVNT GYSRQ+VIQ T+  +Q G   +GMGV +  V 
Sbjct: 4   LNIGARALNANLAALQVIGNNIANVNTPGYSRQNVIQQTSGYQQMGNGYFGMGVEIATVE 63

Query: 66  RSWDQFAVKEL----NIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVKS 121
           RS +Q+  +E     ++A+ D A +    + L+      S+     + E LN W D    
Sbjct: 64  RSHNQYLTREAQKAGSVAAAD-ALRYARLQQLESAFPTGSAGLGTALNEMLNAWTD---- 118

Query: 122 LADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRDL 181
           ++ SP +L AR VV+ K + ++  L +    +   ++ T + +   V  IN LA ++  +
Sbjct: 119 VSSSPGNLTARVVVIAKGEELASRLRNTAAQIDSLQNTTKQQVGGAVNIINGLAKDLAKV 178

Query: 182 QRLMMRVPG---PHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTE 238
              +    G     NDL+D+ ++++S+L++Y + T      G   ++ I     LV G++
Sbjct: 179 NERITESQGNGHTPNDLLDQRDRILSDLNKYVQTTNVPSDSG-AVSVFIAGSQPLVLGSQ 237

Query: 239 ASQLRVIDGFPDTQQHRLAMVEGKALKAISARDI-GGKMEAILDMRDEHIPYLMDEVGRL 297
           A+ L       D+ +  L+ V+G     I   ++ GG++  ++   ++ +    + +GR+
Sbjct: 238 ANALAAGQDSTDSARVALSFVQGGVSTPIPDANLGGGELAGLMRFMNQDLVDTQNLLGRM 297

Query: 298 ALSFSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRVVTNSNSKADMAVFIEDVSQL 357
           AL+ +  VN     G+DL+GN G   F   N    A       +   A+++  + D + L
Sbjct: 298 ALATATTVNNQHKLGVDLQGNPGQNFF---NTPAAAVGLARPGNTGSAEVSASVADPTAL 354

Query: 358 KGGEYSMQYNGSEF-VVTLPSGQQTVLPVVKGNVYVDGLRVEVRNPPQV-GERILVRPTR 415
              +Y +++  +   VV L  G  T  PV      VDGL   + N     G+R LVRP  
Sbjct: 355 VAPDYELRFEATGMSVVRLSDGTST--PVTSLPAVVDGLTFNLDNGAGAPGDRFLVRPYA 412

Query: 416 NGAAAIRLATEDATKIAAQSFEAST--TFAQGKAKFKILQA----GDVREFEVIVSPTGD 469
             A  +++A     K+AA S    T  T   G    + L A     ++ +   I      
Sbjct: 413 AAARDLQVAIGSPDKLAAASPVMVTPGTGNSGGLSVESLYASSASANLTDPVTITFLADG 472

Query: 470 QFAVTDTKGNILLQPQPYPPTG-------PVTVLGTTFELTEGALPNDKFTANLVPSEG- 521
            F  T           P PP          +T+ G +  +       D F+    P+ G 
Sbjct: 473 SFTATGLGPGNPAPDNPGPPPSYNFKPGEAITLNGWSLTMRGSPGAGDTFSIGAAPAGGI 532

Query: 522 --DNGNLRKMINIQTAKRMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQS 579
             + GN   M+ ++           + D Y +L  D+G ++       D +      A++
Sbjct: 533 SQNAGNSTGMLALRDLPTYGG--VPLSDGYVSLFADIGTRVQGAKFAADFSANIANTAET 590

Query: 580 RIASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621
             A+++GVNLDEEAA ++++QQAY AS++ +Q +  TF+++L
Sbjct: 591 ARANVAGVNLDEEAARLLQYQQAYQASAKFLQIAQSTFDSLL 632