Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., flagellar hook-associated protein FlgK from Magnetospirillum magneticum AMB-1

 Score = 72.0 bits (175), Expect = 1e-16
 Identities = 75/320 (23%), Positives = 138/320 (43%), Gaps = 22/320 (6%)

Query: 6   LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65
           LN     +LT Q+ L+    N+ NVNT+GY R+   Q T   R   G   G GV    + 
Sbjct: 7   LNSALSGLLTNQKGLDVISQNVVNVNTKGYVRK---QMTPESRVVAG--VGAGVQQGALT 61

Query: 66  RSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSV-ASKKIPENLNEWFDSVKSLAD 124
           R+ D+  ++++   ++       T+     L  +  +V +S  I   +     S ++LA 
Sbjct: 62  RNVDEGLMRDIRRQTSTQGALDVTQTYYPRLEDMFGTVGSSNSISHQIETLQASFETLAT 121

Query: 125 SPNDLGARKVVLEKSKLISQNLNDF---HETVRLQKDITNKGLALGVERINQLALEIRDL 181
             N    +   ++ +  ++   N+     + +RL+ D   + L     ++N+   +I DL
Sbjct: 122 QVNTPAFQSSTVQTANDMTDQFNEMTTHMQNLRLEAD---RALHDTTGQVNKQLEDIFDL 178

Query: 182 QRLMMR---VPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTE 238
            + ++R   + G   DL DK +  ++ LS+Y  +   +R  G    +   +G TLV    
Sbjct: 179 NQKIVRNNAIGGDIGDLQDKRDNALTTLSKYMDIQYFERGDG-SVGVFTKSGKTLVDKGP 237

Query: 239 ASQLRVIDGFPDTQQHRLAMVEGK-ALKAISARDIG-----GKMEAILDMRDEHIPYLMD 292
           A    V     D+          K  L    + D+G     G++ A+LD+RD  +P L  
Sbjct: 238 AVLSHVATTITDSWMTSAGGNFNKLTLSTTDSPDVGEDINDGEVRALLDLRDTIVPNLQA 297

Query: 293 EVGRLALSFSHEVNTLQSQG 312
           ++  +A      VN + ++G
Sbjct: 298 QIDEVASKLKDAVNQVHNRG 317



 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 495 VLGTTFELTEGALPNDKFTANLVPSEGDNGNLRKMINIQTAKRMNDNESTIIDLYHNLNT 554
           + G+  +++ G++  +        SEGDN      + +  A     + +T   LY    T
Sbjct: 721 IQGSPAKVSRGSMQYNTDLGKYFLSEGDNTTA---LALGAAMSSKTDMATAGSLYAGSYT 777

Query: 555 DVGLKMATMTRL-TDVARLEK---------EAAQSRIASISGVNLDEEAANMMKFQQAYM 604
                 A++ ++ TD A  +          +A  S+ AS SGVNLDEE ANM+ FQQAY 
Sbjct: 778 FAEHAAASIAQVSTDAAHAKDRQDYQTTLGQALNSQFASTSGVNLDEEVANMINFQQAYS 837

Query: 605 ASSRIIQASNDTFNTIL 621
           AS+++I    +  +T++
Sbjct: 838 ASAKVISTLQEMLDTLV 854