Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., flagellar hook-associated protein K (NCBI) from Escherichia coli BW25113

 Score =  174 bits (441), Expect = 9e-48
 Identities = 124/450 (27%), Positives = 213/450 (47%), Gaps = 27/450 (6%)

Query: 3   SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVE 62
           S L+N     +  AQ  LNT  +NIS+ N  GY+RQ+ I          G   G GV+V 
Sbjct: 2   SSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVS 61

Query: 63  NVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVKSL 122
            V+R +D F   +L  A T  +      E +  +  +LS+ ++  +   + ++F S+++L
Sbjct: 62  GVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLST-STSSLATQMQDFFTSLQTL 120

Query: 123 ADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRDLQ 182
             +  D  AR+ ++ KS+ +        + +R Q    N  +   V++IN  A +I  L 
Sbjct: 121 VSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLN 180

Query: 183 RLMMRVPG-----PHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGT 237
             + R+ G       N+L+D+ ++LVSEL+Q   V V+ +  G  +NI + NG++LV G+
Sbjct: 181 DQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGT-YNITMANGYSLVQGS 239

Query: 238 EASQLRVIDGFPDTQQHRLAMVEGKA------LKAISARDIGGKMEAILDMRDEHIPYLM 291
            A QL  +    D  +  +A V+G A       K ++   +GG    IL  R + +    
Sbjct: 240 TARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGG----ILTFRSQDLDQTR 295

Query: 292 DEVGRLALSFSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRVVTNSNSKADMAV-- 349
           + +G+LAL+F+   NT    G D  G+ G   F       I +  V+ N+ +K D+A+  
Sbjct: 296 NTLGQLALAFAEAFNTQHKAGFDANGDAGEDFF------AIGKPAVLQNTKNKGDVAIGA 349

Query: 350 FIEDVSQLKGGEYSMQYNGSEFVVTLPSGQQ--TVLPVVKGNVYVDGLRVEVRNPPQVGE 407
            + D S +   +Y + ++ +++ VT  +     TV P   G V  DGL +     P V +
Sbjct: 350 TVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVND 409

Query: 408 RILVRPTRNGAAAIRLATEDATKIAAQSFE 437
              ++P  +    + +   D  KIA  S E
Sbjct: 410 SFTLKPVSDAIVNMDVLITDEAKIAMASEE 439



 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)

Query: 405 VGERILVRPTRN-GAAAIRLATEDATKIAAQSFEASTTFAQGKAKFKILQAGDVREFEVI 463
           +G+  +++ T+N G  AI     DA+ + A  ++ S                D  +++V 
Sbjct: 330 IGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISF---------------DNNQWQVT 374

Query: 464 VSPTGDQFAVT-DTKGNILLQPQPYPPTGPVTVLGT-TFELTEGALPN------DKFTAN 515
              +   F VT D  G +         TG   V  + T +    A+ N      D+    
Sbjct: 375 RLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIA 434

Query: 516 LVPSE----GDNGNLRKMINIQTAKRMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVAR 571
           +   E     DN N + ++++Q+  +      +  D Y +L +D+G K AT+   +    
Sbjct: 435 MASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQG 494

Query: 572 LEKEAAQSRIASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTILALR 624
                  ++  SISGVNLDEE  N+ +FQQ Y+A+++++Q +N  F+ ++ +R
Sbjct: 495 NVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR 547