Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., flagellar hook-associated protein FlgK from Dickeya dianthicola ME23

 Score =  182 bits (462), Expect = 4e-50
 Identities = 161/669 (24%), Positives = 293/669 (43%), Gaps = 78/669 (11%)

Query: 3   SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVE 62
           S+L+N G   +  AQ  L+T  +NISN    GYSRQ+ +   N          G GV V 
Sbjct: 2   SNLINTGMSGLSAAQAALSTVSNNISNQAVTGYSRQNALLAQNNGTNISAGYIGNGVTVV 61

Query: 63  NVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVKSL 122
           ++ R ++ F  K+L  A T  +      + +  +  LLSS +S  +   + ++F ++++L
Sbjct: 62  SINRDYNDFVAKQLRSAQTTSSSTTSYYDQISKIDNLLSS-SSSSLSTTIQDFFKNLQNL 120

Query: 123 ADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNK---GLALGVERINQLALEIR 179
             + +D   R+ VL K+  +   +N F  T +  +D+ +     +++ V +IN  A +I 
Sbjct: 121 TSNSSDSSVRQTVLGKAGAL---VNQFKITDQYLRDMDSNISGEISITVTQINTYAKQIA 177

Query: 180 DLQRLMMRVPGPH-----NDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLV 234
           D+   ++R+ G +     NDL+D+ + LV++L++   V V   + G+ +NI + NG  LV
Sbjct: 178 DINDQIVRLKGANNGASPNDLLDQRDNLVNDLNKLVGVDVAV-QDGDVYNISLKNGLNLV 236

Query: 235 SGTEASQLRVIDGFPDTQQHRLAMVE--GKALKAISARDIGGKMEAILDMRDEHIPYLMD 292
            G   + L       D  +  ++  +    A +   +   GG +  +L  R   +    +
Sbjct: 237 QGKSYNTLIATPSSTDPARTTVSYNDAIAGASEVKESTITGGSLGGLLSFRSSTLDSARN 296

Query: 293 EVGRLALSFSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRVVTNSNSKADMAVFIE 352
           ++G++AL+F+   N     G DL    G   F  V   V  +S   T++          E
Sbjct: 297 QLGQMALAFTDAFNQQHKAGFDLNNAQGEDFF-GVGSSVTLKSAKNTSAT---------E 346

Query: 353 DVSQLKGGEYSMQYNGSEFVVTLPSGQQTVLPVVKGNVYVDGLRVEVRNPPQVGERILVR 412
             S      YS+QYNG+ + VT   G      +    +  DG  +++      G+    +
Sbjct: 347 LTSSYLSDTYSLQYNGASWNVTRSDGTAASSTLSGSALSFDGFTIDISGSAASGDTFNFK 406

Query: 413 ------------PTRNGAAAIRLATEDATKIAAQSF-----------------------E 437
                       PT + +AA  LA  D   I A  +                        
Sbjct: 407 VSPGQSSISQTAPTGSTSAA-SLARNDTNYIKASDYSVKFVGPSASDWSITRSSDGADLS 465

Query: 438 ASTTFAQGKAKFKILQAGDVREFEVIVSPTG-DQFAVTDTKGNILLQPQPYPPTGPVTVL 496
           +S T+             D  + ++  +P   D F V   +  ++        +  +   
Sbjct: 466 SSATYTTASGSTPASLIFDGMKLDIAGTPAAKDLFTVKGVRDVVVDMSVKVTDSSKIAAA 525

Query: 497 GTTFELTEGALPNDKFTANLVPSEGDNGNLRKMINIQTAKRMNDNESTIIDLYHNLNTDV 556
           G +     G +              DN N + ++N+QT K + +N+S+I   Y +L  D+
Sbjct: 526 GASLTSAGGGV-------------SDNTNAKALLNLQTVK-VVENKSSISQAYASLVGDI 571

Query: 557 GLKMATMTRLTDVARLE-KEAAQSRIASISGVNLDEEAANMMKFQQAYMASSRIIQASND 615
           G K +T  ++TD ++        +   S+SGVNLDEE  ++++FQQ YMA++++IQ ++ 
Sbjct: 572 GNKTST-AKVTDTSQKNVVSQLTTEQQSVSGVNLDEEYGDLVRFQQYYMANAKVIQTAST 630

Query: 616 TFNTILALR 624
            F+ +LA+R
Sbjct: 631 IFDALLAIR 639