Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., Flagellar hook-associated protein 1 from Alteromonas macleodii MIT1002

 Score =  153 bits (387), Expect = 2e-41
 Identities = 176/699 (25%), Positives = 294/699 (42%), Gaps = 108/699 (15%)

Query: 4   DLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV-IQGTNAPRQYGGETYGMGVHVE 62
           DL ++ T  V  + + L TT +NI+NVNT GY R+   +Q +             GV + 
Sbjct: 5   DLFSLATSGVNASSKLLQTTSNNIANVNTPGYVRERTELQNSQV----------FGVEIG 54

Query: 63  NVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVKSL 122
           N  R  + FA  +L    T              +  LL+S A+  I + L+E+F ++++ 
Sbjct: 55  NTERIINVFAQNQLRRDITSVGELEAFSSKTAAIDNLLASEANS-ISQGLSEYFAALQTA 113

Query: 123 ADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRDLQ 182
           AD P +L +R  VL KS+ + Q +    + +  +++  N      V R N L   I DL 
Sbjct: 114 ADDPTNLASRDQVLGKSESLYQRMKTLSDYMLEKEEELNLEFTSMVNRANTLIGNIGDLN 173

Query: 183 RLMMRVPGPHND-----LMDKHEKLVSELSQYTKVTVTQRKHGEG-FNIHIGNGHTLVSG 236
           R ++   G +       L+++ ++ + EL+    +TV +     G   I++ +G +LV  
Sbjct: 174 RNIVIANGNNTSDQPSALLNERDQAIDELASIMGITVKESTTQNGAVTINLTSGESLVLE 233

Query: 237 TEASQLRVIDGFPD--TQQHRLAMVEGKALK-----AISARDIGGKMEAILDMRDEHIPY 289
             A  L  +    D  T++ +L    G   K      +   D+GG +  +   R+E +  
Sbjct: 234 NGAFNLFELSSNADLTTKEIKLETNFGSQTKNDASIRVVEEDLGGALGGLFRYRNEVLGP 293

Query: 290 LMDEVGRLALSFSHEVNTLQSQGLDLRGNVGSALF----------TDVNLDVIARSRVVT 339
            M +VG+L+++F+  +NT    G+DL G +G  +F           D + D I   ++  
Sbjct: 294 TMRDVGQLSVAFADAMNTQNKLGMDLDGQIGGNIFDIPFFRGLAYEDTSGDYIVTGQLTE 353

Query: 340 NSNSKADMAVFIEDVSQLKGGEYSMQYNGSEFVVTLPS----------GQQTVLPVVKGN 389
              ++   A +  +V  +  G        ++  VTL +          GQ  V P V   
Sbjct: 354 GKGAELTDADYRIEVMAVSAGV------PTQIKVTLLNPDGTPKKDGMGQDIVDPSVAVT 407

Query: 390 V----YVDGLRVEVRNPP--QVGERILVRPTRNGAAAIRLATEDATKIAAQSFEASTTFA 443
                   G+ V         VG   L++P +N A+ I +AT     +A         FA
Sbjct: 408 AGFAELAGGIEVNFSGSDAYTVGNEFLIQPAKNVASNIEMATNRPEDLA---------FA 458

Query: 444 QG-KAKFKILQAGDVREFEVIVSPTGDQFAVTDTKGNILLQP------------QPYPPT 490
              +A       G     +V VS T    +  D  G +L               +    +
Sbjct: 459 NPVRAGADSTNLGSANVIDVTVSNTEVGTSAFDGAGGLLNSAPAQISFTAADTYEVLDGS 518

Query: 491 GPV--TVLGTTFELTE-----GALPNDKFTANL--VPSEG-------------DNGN--- 525
           G V  TV+GTT +LT      G  P+  F  +L  VP  G             DN N   
Sbjct: 519 GTVLATVMGTT-DLTNLISQAGISPDPGFDLSLDGVPKAGDSFSISYNTDGFNDNSNALN 577

Query: 526 ---LRKMINIQTAKRMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQSRIA 582
              L+    +Q +    +   T  D Y ++   +G   +  +     A   K  +Q+   
Sbjct: 578 LAALQNENKVQVSSEATNTPRTFQDAYASMVGRIGEDASMASVSLASAEAMKVQSQNWFE 637

Query: 583 SISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621
           S+SGV+LDEEAAN++K+QQ+Y A++RI+  + + FNTIL
Sbjct: 638 SVSGVSLDEEAANLIKYQQSYAAAARILSTAQELFNTIL 676