Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., flagellar hook associated protein from Agrobacterium fabrum C58

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 57/303 (18%), Positives = 129/303 (42%), Gaps = 25/303 (8%)

Query: 10  TQSVLTAQRQLNTTG-------HNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVE 62
           T ++ TAQ   N TG        NI+NV    Y +++ I GT             G  + 
Sbjct: 4   TSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTM----------AGASIV 53

Query: 63  NVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPEN-LNEWFDSVKS 121
           +  R+ ++  +++   +S+  + +      L+ +  +      +  P N + E   S+  
Sbjct: 54  SNGRAQNESLLRQTISSSSLASGQSSVLSGLEEIKSIFGGNNYESSPANYMKELLKSLDG 113

Query: 122 LADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRDL 181
            A  P+D       +  +  ++ +LN+    ++  +   +K ++L V+++N L  +  + 
Sbjct: 114 YAAKPSDAALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQVDKLNGLLAKFEEA 173

Query: 182 Q---RLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTE 238
               +    + G  +D +D+ E L+ ++S    + V  R + +   ++  +G TL     
Sbjct: 174 NNEVKAQTAIGGDASDALDQRETLLKDISSIVGINVVNRPNND-VALYTTDGATLFEIVP 232

Query: 239 AS-QLRVIDGFPDTQQHRLAMVEGKALKAISARD--IGGKMEAILDMRDEHIPYLMDEVG 295
            S   +   G+  T       ++G ALKA +  +    G ++ ++ +RD+  P +  ++ 
Sbjct: 233 RSVTFKTQPGYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLD 292

Query: 296 RLA 298
            +A
Sbjct: 293 EIA 295



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 10/47 (21%), Positives = 29/47 (61%)

Query: 575 EAAQSRIASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621
           E +    ++ + V+LDEE + +M  +Q+Y A+++++   ++   +++
Sbjct: 442 ERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTVDEMLKSLM 488