Pairwise Alignments

Query, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., Flagellar hook-associated protein FlgL from Variovorax sp. SCN45

 Score =  123 bits (308), Expect = 1e-32
 Identities = 97/404 (24%), Positives = 173/404 (42%), Gaps = 12/404 (2%)

Query: 4   RISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQ 63
           RIS+   Y+     +  Q+ K+F  Q QLA+  K LSA D+P+       V Q   +  Q
Sbjct: 2   RISTSSFYEQNVGAMGLQQQKLFRVQQQLATNSKFLSAGDDPVGAARSLGVSQTLSENAQ 61

Query: 64  YLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNF 123
           Y  +       L  +E  +++      + K   +   NG+L+  DR + A  +Q   +  
Sbjct: 62  YATSRQRASLALSTEENALNSVTSILQNIKTLTVNAGNGTLTDADRASLATTIQSAYDQL 121

Query: 124 INLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSK 183
           + +AN  D +G ++FAG K  + PF     G V Y GD  QR M++  + ++   + G  
Sbjct: 122 VGVANSDDGNGQFLFAGFKSGSPPFVTGPGGGVQYVGDQGQRLMQVDVARQMSTGDDGRS 181

Query: 184 VFMEIPNPFGSYEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGKNGYQLERN- 242
           +F  +    G    + A   GS +    A+ +      +Y   F     G N   + ++ 
Sbjct: 182 IFQSVQGGAGYVASSSASNTGSGVF--GAIGITDATAPNYGKDFTISFNGGNYTVMTKDV 239

Query: 243 -GSVVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTP-----RTTFSVFDTFRDAIR- 295
              V  AG + A + I F  + ++  G+ + GD+ +++         F+       A+R 
Sbjct: 240 PPVVAGAGAYTAGSPIDFGGVQLKFTGKPADGDSFDVSTAQNAGTDVFAAIGQLVTALRT 299

Query: 296 --YAEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLA 353
                G  + A     L     +   A  ++    + +G+R + +D  +      K+   
Sbjct: 300 PLAGGGEAAQAQLQNALATANRKVTNAHDNVLTVLSSVGSRQTEIDSLDSGGAARKLQEE 359

Query: 354 KSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397
              S+ EDLD   A+ EF +   +L+A+Q  F K   ++LFNY+
Sbjct: 360 SYLSSIEDLDPYSAIAEFYQRQSSLQATQMTFAKLNSISLFNYL 403