Pairwise Alignments

Query, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Flagellar hook-associated protein FlgL from Pseudomonas putida KT2440

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 52/187 (27%), Positives = 92/187 (49%)

Query: 4   RISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQ 63
           RIS+   Y+       +  S +     Q+ S  ++ SA D+P+    +  + QQ   L Q
Sbjct: 2   RISTAQFYETSATSYSQNYSNLAKITEQVTSKSRIQSAGDDPVGAARLLVLQQQSALLEQ 61

Query: 64  YLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNF 123
           Y   +  V+N L  +E ++S   +    A    ++  NG LS  DR + A  ++E+  N 
Sbjct: 62  YSGNMTTVKNALLQEESVLSTINDALQRASELAIQAGNGGLSDADRTSIASEIKEIEANV 121

Query: 124 INLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSK 183
             L N +D +G+Y+F G+K    P+ R+  G  +Y GD  Q  +++S++L +  N+ G  
Sbjct: 122 FGLLNSRDANGDYMFGGSKSSTPPYVRNADGTYSYQGDQTQLSLQVSDTLRLATNDTGYS 181

Query: 184 VFMEIPN 190
           +F +  N
Sbjct: 182 IFDQATN 188



 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)

Query: 246 VQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTPRT--TFSVFDTF---RDAIRY---- 296
           + +G   A   +    +  Q      +GD   +   T  T +V DT    R A+      
Sbjct: 364 IGSGTVGAGNAVTVAGVTYQFDSAPKQGDQFSVNANTHRTQNVLDTLGQLRSALEKPLDT 423

Query: 297 --AEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAK 354
             A+ ++  A+++A     +    +A   ++ TR  IGAR ++LDIQ +++E   ++   
Sbjct: 424 PEAQAALKTATDSA-----ISNLASARDRIDITRGSIGARGNSLDIQAQENESLGLANQS 478

Query: 355 SKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397
           ++S   D D A A I+       LEASQ AF +   L+LF+ I
Sbjct: 479 TQSAIGDTDMASATIQLTLQQAMLEASQLAFARISQLSLFDKI 521