Pairwise Alignments

Query, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

 Score =  141 bits (355), Expect = 3e-38
 Identities = 79/172 (45%), Positives = 114/172 (66%), Gaps = 6/172 (3%)

Query: 1   MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
           MT+ + TN SA+ A      ++  L+T+MERLS+G RINSAKDDAAGL I++ +T+Q +G
Sbjct: 1   MTV-IGTNSSALRATNASAASSKALSTAMERLSTGKRINSAKDDAAGLAIASSMTSQIKG 59

Query: 61  LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
           +   +RNANDGIS+AQTAEGA+ E T++LQRMR+L +Q+ N TN  + +  +  E   L 
Sbjct: 60  MTQGIRNANDGISLAQTAEGALGEVTNMLQRMRELTVQAGNDTNDDTAKGNIKSEIDQLA 119

Query: 121 DELNRIAETTSFGGRKLLNGSFGEAS-----FQIGSSSGEAIIMGLTSVRAD 167
            ++ ++   TSF G KL +GS G AS      Q G++S +AI + L +V  D
Sbjct: 120 TQIGKVLSDTSFNGIKLFDGSAGPASDGKINIQAGANSSDAIEIDLGNVEDD 171



 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 92/297 (30%), Positives = 132/297 (44%), Gaps = 34/297 (11%)

Query: 102 GTNSASERQALNEESVALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGL 161
           GTNS++ R      S A    L+   E  S G R  +N +  +A+    +SS  + I G+
Sbjct: 5   GTNSSALRAT--NASAASSKALSTAMERLSTGKR--INSAKDDAAGLAIASSMTSQIKGM 60

Query: 162 TSVRADDFRMGGQSFIAEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDG--DDI 219
           T       R         Q      G          E T + G     D  AK     +I
Sbjct: 61  TQ----GIRNANDGISLAQTAEGALGEVTNMLQRMRELTVQAGNDTN-DDTAKGNIKSEI 115

Query: 220 EELATYINGQTDLFKASVDQEGKLQIFVAEPNIEGNFNISGGL----ATELGLNG----- 270
           ++LAT I     +   +     KL    A P  +G  NI  G     A E+ L       
Sbjct: 116 DQLATQIG---KVLSDTSFNGIKLFDGSAGPASDGKINIQAGANSSDAIEIDLGNVEDDT 172

Query: 271 ------GPGVKTTVQDIDITS--VGGSQNAVGIIDAALKYVDSQRADLGAKQNRLSHSIS 322
                   G  TT  D+   +  VG    A+ + D+ALK +D+ RA+LGA QNRL  +++
Sbjct: 173 DVAAVVTAGATTTALDVTAGTFDVGA---ALDLYDSALKAIDTSRANLGAVQNRLESTVN 229

Query: 323 NLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNSAISLLQ 379
            L+    N+  +KSRI+D DF+ ETT L K+QIL QA T++LAQA Q   + + L+Q
Sbjct: 230 TLTANVTNLTDAKSRIEDADFSTETTALAKAQILSQASTAMLAQANQSQQNVMKLIQ 286