Pairwise Alignments

Query, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Flagellin FlaB1 from Methylophilus sp. DMC18

 Score =  141 bits (356), Expect = 2e-38
 Identities = 74/157 (47%), Positives = 106/157 (67%), Gaps = 2/157 (1%)

Query: 1   MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
           M   +NTN+S++ AQR L  +   LN S++RLSSG R+NSAKDDAAGL I+ R+ +Q RG
Sbjct: 1   MAAVINTNISSLNAQRNLNASQAGLNQSIQRLSSGLRVNSAKDDAAGLAIATRMDSQVRG 60

Query: 61  LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
            DVA+RN+ND IS  Q  EG ++++T +LQRMR+LA+Q+ANG+  + +R  L+ E   L 
Sbjct: 61  NDVAIRNSNDAISYLQVTEGGLSKATDVLQRMRELAVQAANGSYGSGDRANLDTEFTQLT 120

Query: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAI 157
            EL R++ +T F G  +  G     +FQIGS S + +
Sbjct: 121 AELTRLSTSTQFNGLNVFGGP--GYTFQIGSGSADTL 155



 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 58/130 (44%), Positives = 77/130 (59%), Gaps = 7/130 (5%)

Query: 257 NISGGLATELGLNGGPGVKTTVQDIDITSVGGSQN-------AVGIIDAALKYVDSQRAD 309
           N+ GG      +  G      V  +   S+ G+         A+  IDA L  V++ RA 
Sbjct: 136 NVFGGPGYTFQIGSGSADTLQVSSVTAASITGNVQTASAATAAITAIDAQLDSVNTSRAS 195

Query: 310 LGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQ 369
           LGA QNR    IS+L    ENV A+KSRI D DFA ET ++T++QILQQAGT++LAQA Q
Sbjct: 196 LGAYQNRFEAVISSLQVNIENVSAAKSRIMDADFASETAKMTRNQILQQAGTAMLAQANQ 255

Query: 370 LPNSAISLLQ 379
           LPNS +SL++
Sbjct: 256 LPNSVMSLIK 265