Pairwise Alignments

Query, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Flagellin B from Alteromonas macleodii MIT1002

 Score =  162 bits (410), Expect = 2e-44
 Identities = 143/425 (33%), Positives = 200/425 (47%), Gaps = 74/425 (17%)

Query: 25  LNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEGAMNE 84
           L+T +ERLSSG RINSA DD+AGLQISNRL ++ R      RN NDGIS AQ AEG + E
Sbjct: 21  LSTRLERLSSGLRINSAADDSAGLQISNRLASEKRAYTQLNRNLNDGISYAQIAEGGLQE 80

Query: 85  STSILQRMRDLALQSANGTNSASERQALNEESVALQDELNRIAETTSFGGR-------KL 137
           S +ILQRMR LA+QS NG NS S+R AL++E   L++ LN IA  T    R        L
Sbjct: 81  SAAILQRMRQLAIQSQNGINSVSDRAALDKEFQQLKNALNGIAYNTEAFNRLPLVDDSDL 140

Query: 138 LNGSFGEASFQIGSSSGEAIIMGLTSVR-----------------ADD----FRMGGQSF 176
           L+ +    S    +   +++  GL S+                  A+D    F + G+  
Sbjct: 141 LSANVPSISDTFTNGVNQSMTSGLRSIAYIPAGSTNIQINLNDNGANDDIQVFTVDGKHL 200

Query: 177 IAEQPKTKEWGVPPTARDLKFE---FTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLF 233
                    W     +     E   F   +G          D + +   +  I+G +  F
Sbjct: 201 AGTPLSAGTWNSNGISNSTSIESTFFLPTNGYEPTASY--DDSNLLTIGSATIDGNSISF 258

Query: 234 KASVDQEGKLQIFV-----AEPNI-----EGNFNISGGLATELGLNGGP----------- 272
               +  G L   +     A+P I      G FN++    T LG  GGP           
Sbjct: 259 TGDQNASGNLNETLTIASNAQPLIISVIGSGAFNVTASW-TSLGNEGGPTFTLGPVDITA 317

Query: 273 ----GVKT----------TVQD--IDITSV---GGSQNAVGIIDAALKYVDSQRADLGAK 313
               GV T          T+ D  +D TS+     +++A+  ID+AL+ V   RA  GAK
Sbjct: 318 TNQLGVGTDFIELTKTPATLTDLGLDGTSLQNESDAESALERIDSALQLVSESRAVYGAK 377

Query: 314 QNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNS 373
            N+++ +I N +   EN+  S S+I D DFA ET  LT++QI++QA  S+ AQAK     
Sbjct: 378 INQMASAIRNNAIGFENISRSHSQITDADFASETALLTQAQIVEQASISVRAQAKSSDEQ 437

Query: 374 AISLL 378
            + LL
Sbjct: 438 VLGLL 442