Pairwise Alignments

Query, 345 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 15/141 (10%)

Query: 212 GARISEALSLERSQISEFKLTFVET-KGKRIRSVPI------SENLYKEIMLASSSSTK- 263
           G RISEAL L    +S        T KG + R VP+      +   Y+ +     +  K 
Sbjct: 177 GLRISEALGLTAGMLSSGTTQITVTGKGNKTRMVPLIAPVLAAVEAYRGLCPYPLAPDKP 236

Query: 264 IFSTTYGS--AHRYIKKALPDY-----VPEGQATHVLRHTFATHFMMNRGDILILQRILG 316
           +F    G   + R ++ A+        +P+    H LRH+FATH +   GD+  +Q +LG
Sbjct: 237 LFRGAKGGPLSPRIVQLAVERMRGALGLPDSATPHALRHSFATHLLSRGGDLRAIQELLG 296

Query: 317 HQKIEQTMAYAHFSPDHLIQA 337
           H  +  T  Y       L+ A
Sbjct: 297 HASLSTTQIYTQVDAAALMNA 317