Pairwise Alignments

Query, 345 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 18/141 (12%)

Query: 206 KICLATGARISEALSLERSQISEFK-LTFVETKGKRIRSVPISENLY----------KEI 254
           ++  A G R++E +SL   Q++  + +  V  KG + R VP+ E             +  
Sbjct: 141 EVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARSE 200

Query: 255 MLASSSSTKIFSTTYGSA-------HRYIKKALPDYVPEGQATHVLRHTFATHFMMNRGD 307
           +L    S  +F +  G         HR   +A    + +  + H LRH FATH + +  D
Sbjct: 201 LLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGIGKALSPHTLRHAFATHLLNHGAD 260

Query: 308 ILILQRILGHQKIEQTMAYAH 328
           + ++Q +LGH  +  T  Y H
Sbjct: 261 LRVVQMLLGHSDLSTTQIYTH 281