Pairwise Alignments

Query, 345 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 13/141 (9%)

Query: 207 ICLATGARISEALSLERSQISEFK--LTFVETKGKRIRSVPISEN---LYKEIMLASSSS 261
           I  A G R SE L L+ S +   +  L   ++KGK+ R VP+S+    L +E        
Sbjct: 219 IIYACGLRRSEVLHLKISDVDSKRGLLIVRQSKGKKDRVVPLSDKTIALLREYYKYERPQ 278

Query: 262 TKIF-------STTYGSAHRYIKKAL-PDYVPEGQATHVLRHTFATHFMMNRGDILILQR 313
             +F         + GS  + +K AL    + +    H LRH+FATH + N  D+  +Q 
Sbjct: 279 YFLFXGKKLNSKYSSGSLQKILKSALGKSGIKKPVTLHWLRHSFATHLLENGTDLRYIQE 338

Query: 314 ILGHQKIEQTMAYAHFSPDHL 334
           ILGH     T  Y H + + +
Sbjct: 339 ILGHNSSRTTEIYTHVTDNSI 359