Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 765 a.a., replication endonuclease from Pectobacterium carotovorum WPP14

 Score =  240 bits (613), Expect = 2e-67
 Identities = 169/502 (33%), Positives = 229/502 (45%), Gaps = 94/502 (18%)

Query: 250 ASSDIMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSNNASPYASWDCVREHQEQQQRNY 309
           A + I R+I++ WW  +L   R   RE L IA+GQVS  ASPYAS   +R+ Q ++  N 
Sbjct: 211 AIASISRLINEEWWTRQLKAQRTRWREALNIAVGQVSKKASPYASKMAIRDVQARRLANM 270

Query: 310 EAIKNMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGLFLTL 369
           + +KN  L +  T E  DL D V  S+SNP IRR ELM    G E   +E    G+F+T+
Sbjct: 271 DYLKNCELENVATGERIDLIDKVMASISNPEIRRMELMSTIAGIERYASEQRDVGMFITI 330

Query: 370 TTPSKYH-------NSYKKGGFIDHWNGA--SPRDAQAYLNKKWQLIRAKLNRDEIRWFG 420
           TTPSKYH          +K  F  +W+    +P+D Q YL + W  +R      +++ +G
Sbjct: 331 TTPSKYHPTRVIGKGENEKVQFNRNWDNEAFTPKDGQRYLVRIWGKMRTAFKDADLKVYG 390

Query: 421 VRVAEPHHDGTPHWHLLIWVRKEDISAVRDTFITYATEEDRGELHPEFEKEKQKPFRKGV 480
           +RV EPHHDGTPHWH++++ ++    +V D    YA +ED  E                 
Sbjct: 391 MRVVEPHHDGTPHWHMMLFCKRAHRQSVIDIMRRYALKEDGDER---------------- 434

Query: 481 YVGPLDYRPRCDFGYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDMARNVS 540
             G   YR  C        KG A GYIAKYISKNIDGYA+DG + DETGKP++DMA  V+
Sbjct: 435 --GAAKYRFECK----HLNKGGAAGYIAKYISKNIDGYALDGQLDDETGKPLRDMAAAVT 488

Query: 541 AWKSRWSIRQFQFFGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELLHYQLI 600
           AW S W I QF+  G   +  YRE R                                  
Sbjct: 489 AWASTWRIPQFKAIGIPTMGAYRECR---------------------------------- 514

Query: 601 GAFKPARVMTNQELVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGPFVKRK 660
                +  + +  L +   +  EA           V  +AD G +  Y+  QGG  V R+
Sbjct: 515 -----SGTLRSVNLTDQFDEQVEA-----------VRCAADAGNFAAYMAAQGGANVSRE 558

Query: 661 ELLVTNVYQELPFASPYAEAIRKLEGIATPE----QVIKTREKVWTIKRKGKETTEGEAV 716
              V    +     + Y E ++K+ GI  P      V +TR   W I  K          
Sbjct: 559 LQTVRVARRVSDTLNEYDEEVQKVVGIFAPHLGAGHVFETRTIEWRIVSKAVAV------ 612

Query: 717 GFGSEATAFGGSAASRSSVNNC 738
                 T      A RS VNNC
Sbjct: 613 ---EPLTLKSAPGAPRSPVNNC 631