Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 741 a.a., replication endonuclease from Erwinia tracheiphila SCR3

 Score =  327 bits (839), Expect = 1e-93
 Identities = 206/507 (40%), Positives = 266/507 (52%), Gaps = 85/507 (16%)

Query: 237 KAPRKYQKQTHLSASSDIMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSNNASPYASWD 296
           +  +KY  +  ++ +  I RM ++ WW GRL ++    REHL IA+G VS     YAS +
Sbjct: 195 RVTKKYVGEDEIAPA--ITRMFNEVWWRGRLRRIAAAWREHLQIAVGNVSKKRHAYASKN 252

Query: 297 CVREHQEQQQRNYEAIKNMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDI 356
           CV + +EQ++R  E +K + L DE+      L +    SV+NPAIRR ELM R RG E+I
Sbjct: 253 CVTDWREQKRRTREFLKGLDLEDEDGNRI-SLIEKYDGSVANPAIRRCELMNRIRGFENI 311

Query: 357 GNELGLQGLFLTLTTPSKYHNSYKKGGFIDHWNGASPRDAQAYLNKKWQLIRAKLNRDEI 416
            NELG  G F TLT PSKYH + K G     WNGASP D Q+YL   W  IRAKL+R+EI
Sbjct: 312 CNELGYVGEFYTLTAPSKYHATTKAGYRNSKWNGASPSDTQSYLTSLWARIRAKLHREEI 371

Query: 417 RWFGVRVAEPHHDGTPHWHLLIWVRKEDISAVRDTFITYATEEDRGELHPEFEKEKQKPF 476
           R FG+RVAEPHHDGTPHWH+L+++  ED+  VR     YA EEDR EL  +  K K+  F
Sbjct: 372 RIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRLIIRDYAWEEDRHELRSD--KAKKARF 429

Query: 477 RKGVYVGPLDYRPRCDFGYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDMA 536
                              IDP KG+ATGY+AKYISKNIDGYA+DG+  DE+G+ +K+ A
Sbjct: 430 HAEA---------------IDPEKGSATGYVAKYISKNIDGYALDGETDDESGELLKETA 474

Query: 537 RNVSAWKSRWSIRQFQFFGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELLH 596
             VSAW +RW IRQFQF GGAPVT                                    
Sbjct: 475 PAVSAWAARWHIRQFQFIGGAPVTV----------------------------------- 499

Query: 597 YQLIGAFKPARVMTNQELVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGPF 656
                 ++  R + + E    ++  +           AAV  +AD G W GY+  QGGPF
Sbjct: 500 ------YRELRRLADTETAHGLSVEF-----------AAVHDAADAGDWAGYVNAQGGPF 542

Query: 657 VKRKELLVTNVYQELPFASPYAEAIRKLEGI----ATPEQVIKTREKVWTIKRKGKETTE 712
           V+R +L V  +Y+     + Y E    + G+          I TR   W I  K      
Sbjct: 543 VRRDDLQVRTLYEPRAEFNQYGEETVCIRGVYDSAVGAGSPILTRLTQWKIVPK------ 596

Query: 713 GEAVGFGSEATAFGGSAASRSSVNNCT 739
             AV    +    G  A SRSSVNNCT
Sbjct: 597 -RAVDLAVDVK--GAPAPSRSSVNNCT 620