Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., Bacteriophage replication gene A protein (GPA) from Enterobacter asburiae PDN3

 Score =  316 bits (809), Expect = 4e-90
 Identities = 196/511 (38%), Positives = 256/511 (50%), Gaps = 87/511 (17%)

Query: 254 IMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSNNASPYASWDCVREHQEQQQRNYEAIK 313
           ++RM S++WW GRL ++    REHL IA+G VS   + YAS  CV E +EQ++R  E +K
Sbjct: 207 VIRMFSEAWWRGRLRRIAAAWREHLQIALGNVSKQRAAYASKRCVTEWREQKRRTREFLK 266

Query: 314 NMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGLFLTLTTPS 373
            M L DEE      L +    SV+NPAIRR ELM R RG E+I   LG  G F TLT P+
Sbjct: 267 GMELEDEEGNRI-SLIEKYDSSVANPAIRRCELMTRIRGFENICEALGYVGEFYTLTAPA 325

Query: 374 KYHNSYKKGGFIDHWNGASPRDAQAYLNKKWQLIRAKLNRDEIRWFGVRVAEPHHDGTPH 433
           +YH + K G     WNGASP D Q Y  + W  IRAKL+RD  R FG+RVAEPHHDGTPH
Sbjct: 326 QYHATLKSGFPNAKWNGASPADTQTYFTRLWARIRAKLHRDGHRIFGIRVAEPHHDGTPH 385

Query: 434 WHLLIWVRKEDISAVRDTFITYATEEDRGELHPEFEKEKQKPFRKGVYVGPLDYRPRCDF 493
           WH+L+++  ED+  VR     YA ++   EL  E  ++                  R   
Sbjct: 386 WHMLMFMLPEDVECVRRIIGDYARQDAAAELQSESARQA-----------------RFHA 428

Query: 494 GYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDMARNVSAWKSRWSIRQFQF 553
             IDP KG+ATGYIAKYISKNIDGYA++G+   E+G  +K+ A  VSAW  RW IRQFQF
Sbjct: 429 DAIDPQKGSATGYIAKYISKNIDGYALNGETDSESGGLLKETASAVSAWAGRWHIRQFQF 488

Query: 554 FGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELLHYQLIGAFKPARVMTNQE 613
            GGAPVT                                          ++  R + + E
Sbjct: 489 IGGAPVTV-----------------------------------------YRELRRLVDTE 507

Query: 614 LVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGPFVKRKELLVTNVYQELPF 673
               ++  +           AAV  +AD G W GY+  QGGPFV+R +L V  +Y+    
Sbjct: 508 AARGLSVEF-----------AAVQEAADAGDWAGYVTAQGGPFVRRDDLQVRTLYEPRAG 556

Query: 674 ASPYAEAIRKLEGI----ATPEQVIKTREKVWTIKRKGKETTEGEAVGFGSEATAFGGSA 729
            + Y E   ++ G+          + TR   W I  K     +   V             
Sbjct: 557 FNQYGEETVRIRGVYDSAVGAGSPVLTRLTQWKIVPKRAADLKDAPV------------- 603

Query: 730 ASRSSVNNCTDPFTGQVSTQLTRLLQPDRLK 760
           ASRSSVNNCT     Q  ++  R    +R+K
Sbjct: 604 ASRSSVNNCTQADLSQPLSRRARRALTERIK 634