Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., Bacteriophage replication gene A protein (GPA) from Enterobacter asburiae PDN3

 Score =  248 bits (634), Expect = 8e-70
 Identities = 198/612 (32%), Positives = 276/612 (45%), Gaps = 123/612 (20%)

Query: 154 KSKQVSFDFEKDEKDRKPVKQRLLAELEQDELRDMAFRIA-KIMEAYLQLTASRKHADRE 212
           +S  + F   +DE  R P       ++   ELR  A RIA ++   Y +L+ +  HA   
Sbjct: 128 ESASIGFLSARDEYARLP-------DMNDKELRKFASRIASQLWSRYEELSDAWAHAHGG 180

Query: 213 EDVDQAVVDAYEALAHFCTQTFGIKAP--------RKYQKQ--THLSASSDIMRMISDSW 262
           ++     +   EA AH   +  G+           +KY+K   T   A S I R+I D W
Sbjct: 181 KET----LFTDEAQAHLYGKVAGVARAFNLTPMYWKKYRKGQITIRQAFSAISRLIKDEW 236

Query: 263 WLGRLVKVRKIMREHLAIAMGQVSNNASPYASWDCVREHQEQQQRNYEAIKNMVLFDEET 322
           W+ +L   R   RE L IA G+V+ + SPYAS   +R+   ++  N E +K+  L ++ T
Sbjct: 237 WVNQLKAQRMRWREALLIAAGEVNKDRSPYASKMAIRDVHARRLANLEYLKSCELENKVT 296

Query: 323 EEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGLFLTLTTPSKYHNSYKKG 382
            E  DL   V  S+SNP IRR ELM    G E     +G  G+F+TLTTPSKYH + + G
Sbjct: 297 GERIDLISKVMGSISNPEIRRMELMNTIAGIERYATSVGDVGMFITLTTPSKYHPTRQIG 356

Query: 383 G------FIDH-WN--GASPRDAQAYLNKKWQLIRAKLNRDEIRWFGVRVAEPHHDGTPH 433
                   ++H WN    +P+D Q YL + W L+R     +++  +G+RV EPHHDGTPH
Sbjct: 357 KGESKTVQLNHGWNETAFTPKDGQRYLCRIWSLMRTAFKDNDLEVYGMRVVEPHHDGTPH 416

Query: 434 WHLLIWVRKEDISAVRDTFITYATEED---RGELHPEFEKEKQKPFRKGVYVGPLDYRPR 490
           WH++++ +     A+ +    YA +ED   +G     FE                     
Sbjct: 417 WHMMLFCKPGQRKAINEIMRRYALKEDGHEKGAAKQRFESRHL----------------- 459

Query: 491 CDFGYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDMARNVSAWKSRWSIRQ 550
                    +G A GYIAKYI+KNIDGYA+DG +  +TGKP+KD A  V+AW S W I Q
Sbjct: 460 --------NQGGAAGYIAKYIAKNIDGYALDGQLDHDTGKPLKDTAAAVTAWASTWRIPQ 511

Query: 551 FQFFGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELLHYQLIGAFKPARVMT 610
           F+  G   +  YRELR+L                                    P  V  
Sbjct: 512 FKPIGLPTMGAYRELRKL------------------------------------PRGVS- 534

Query: 611 NQELVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGPFVKRKELLVTNVYQE 670
                  IA  ++ R       V A   +ADEG +  YI+ QGG  + R    V    + 
Sbjct: 535 -------IASEFDDR-------VEAARVAADEGDFERYIIAQGGANMPRDAQAVRVARKV 580

Query: 671 LPFASPYAEAIRKLEGIATP----EQVIKTREKVWTIKRKGKETTEGEAVGFGSEATAFG 726
               + Y E I ++ GI  P     +V  TR   W I  K         V      T   
Sbjct: 581 TDEVNDYEEDIERVVGIYAPHLGAHRVHVTRTAEWRIVPK---------VLAVEPLTLKS 631

Query: 727 GSAASRSSVNNC 738
           GSAA RS VNNC
Sbjct: 632 GSAAPRSPVNNC 643