Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., replication endonuclease from Dickeya dianthicola ME23

 Score =  204 bits (520), Expect = 1e-56
 Identities = 162/518 (31%), Positives = 226/518 (43%), Gaps = 113/518 (21%)

Query: 246 THLSASSDIMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSNNASPYASWDCVREHQEQQ 305
           T   A + IMR+++  WW  +L   R   RE L IA G+VS  ASP+ S   +++ + ++
Sbjct: 216 TLAQACAGIMRLVTPRWWERQLKIQRTRWREALWIAGGEVSRAASPFLSRQALQDIRYRR 275

Query: 306 QRNYEAIKNMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGL 365
               + +K+  L +    E  DL D V  S++NP IRR ELM    G E         G+
Sbjct: 276 LATLDFLKSRELENTRNGERVDLIDKVMGSIANPDIRRMELMTMLAGIERYATAHQHIGM 335

Query: 366 FLTLTTPSKYHNSYKKG--------GFIDHWNGASPRDAQAYLNKKWQLIRAKLNRDEIR 417
            +TLT P  YH +  +G        G++   +  SP+  Q YL + W  IR  L   ++ 
Sbjct: 336 LVTLTAPGHYHPTRTRGHDQVLVNTGWMP--DCPSPKMTQHYLVRLWGKIRTALKDRKLH 393

Query: 418 WFGVRVAEPHHDGTPHWHLLIWVRKEDISAVRDTFITYA--TEEDRGELHPEFEKEKQKP 475
            +G+RV EPHHDGTPHWH++++  +    A+ D    YA  +E DR   H          
Sbjct: 394 IYGLRVVEPHHDGTPHWHMMLYCARAQRQAIVDILRRYAQPSESDRAAAHHR-------- 445

Query: 476 FRKGVYVGPLDYRPRCDFGYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDM 535
                         R D  +I+  KG A  Y+AKYI+KNIDGYA+DG+   ETGKP+KDM
Sbjct: 446 --------------RFDCKHIN--KGGAAAYVAKYIAKNIDGYALDGESDHETGKPLKDM 489

Query: 536 ARNVSAWKSRWSIRQFQFFGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELL 595
           A   SAW S W I QF F G   V  YRE RR+ +++                       
Sbjct: 490 AAAASAWASLWRIPQFHFIGLPTVGAYRECRRIRSRS----------------------- 526

Query: 596 HYQLIGAFKPARVMTNQELVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGP 655
                             L + + +  E           AV  +AD G +  YI  QGG 
Sbjct: 527 ------------------LQDALGEQAE-----------AVRHAADRGDFAAYIEAQGGA 557

Query: 656 FVKRKELLVTNVYQELPFASPYAEAIRKLEGIATPEQ----VIKTREKVWTIKRKGKETT 711
            V R+   V     +    + Y E I +  GI + ++    V  TR   W +  K     
Sbjct: 558 NVSRQCQSVRVARADSERLNAYDETIVRTVGIFSSQRGNACVFTTRPDEWQLVAKNH--- 614

Query: 712 EGEAVGFGSEATAFGGSAASR------SSVNNCTDPFT 743
                       A GG A SR      SSVNNC   F+
Sbjct: 615 ------------AGGGIADSRRPARPWSSVNNCGGVFS 640