Pairwise Alignments

Query, 605 a.a., terminase from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., terminase family protein from Erwinia tracheiphila SCR3

 Score =  123 bits (309), Expect = 8e-33
 Identities = 87/248 (35%), Positives = 134/248 (54%), Gaps = 19/248 (7%)

Query: 145 VKNDV---SEITEADFKLWHDSLFAYQHT-MRNNLHQRTRNILKSRQIGATYYFAGEALE 200
           +KN+V   S+I +A   + H+  F YQ T +R       R+I KSRQIGAT  F+ EAL 
Sbjct: 1   MKNNVFSQSQI-QAMADILHNDSFDYQATWLRVGKLNTDRSITKSRQIGATQLFSREALL 59

Query: 201 QAILTGDNQIFLSASRAQADVFRRYIVAIAKEFLGIEITGNPSTLS--NGAELHYLSTNG 258
            A+ TGDNQ++ + +   A V   Y+  ++   +G+ +T N  +L   +GA + ++    
Sbjct: 60  NALTTGDNQVWFAHTIEHARVALMYMSNLSAR-VGVRLTSNGYSLQLDDGAVISFVGEES 118

Query: 259 KTAQSYHGHVYIDEYFWIGKFDELNKVASAMATHKKWRKTYFSTPSSKMHPAYSFWTGEK 318
             A +  G+VY+DE+ W        KVA+A+A HK+ R T F++PS   + A+  W G  
Sbjct: 119 HCA-ALAGNVYLDEFAWFNNPLRAAKVAAAIACHKRHRLTMFTSPSDN-YDAFRVWNG-- 174

Query: 319 WRGDKTTRKNIEFPTFDELRDGGRLCPDKQWRYVVTIEDAAKGGCDLFDIEELREEYSET 378
                TTR++   P  +        C D  WR  VT++ A + GC+LF  EE++ EYS+ 
Sbjct: 175 -----TTRRHRPSPLINT--GDSVFCTDGVWRQSVTLDAACQRGCNLFAPEEIKHEYSDD 227

Query: 379 DFNNLFMC 386
           D+  LF C
Sbjct: 228 DYRLLFGC 235