Pairwise Alignments

Query, 605 a.a., terminase from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., Uncharacterized conserved protein from Enterobacter asburiae PDN3

 Score =  434 bits (1117), Expect = e-126
 Identities = 253/602 (42%), Positives = 359/602 (59%), Gaps = 41/602 (6%)

Query: 8   RQAARALYLKAWTPREIADELNLNSDRIIYYWADKFGWRDMLREQTIDEAIANRIQTLLE 67
           R+ AR LY + +   +I + L L    +   W  + GW +         A  NR+++ LE
Sbjct: 14  RRQARLLYWQGFAVPQICEMLQLKRPTV-QSWKQRDGWEET--------APINRVESTLE 64

Query: 68  ---VENPSKPQLDMLDRLINHHVKLKKLRATEQPTQPNEAGTVSAQSGAHNSKSGSPKAE 124
              ++  +KP L   D  +   +     R  E+  + N  G    Q+G  N    +P   
Sbjct: 65  ARLIQLYAKPDLTAHDFKVADFLS----RQMERLARVNRYG----QTG--NEVDLNPNIA 114

Query: 125 SGTQTGDSGKQSAPSGKRKKVKNDV--SEITEADFKLWHDSLFAYQ-HTMRNNLHQRTRN 181
           S  +           G RKK K +    E  E   +++ D  F YQ    +  L  R R+
Sbjct: 115 SRNK-----------GDRKKPKRNYFSEEAIEKLEEIFFDQSFDYQLRWHKAGLEHRIRH 163

Query: 182 ILKSRQIGATYYFAGEALEQAILTGDNQIFLSASRAQADVFRRYIVAIAKEFLGIEITGN 241
           ILKSRQIGAT+YFA E+L +A+ TG NQIFLSAS+ QA VFR+YI+A A+  + ++++G+
Sbjct: 164 ILKSRQIGATFYFARESLLRALKTGQNQIFLSASKTQAYVFRKYIIAFAR-LVDVDLSGD 222

Query: 242 PSTL-SNGAELHYLSTNGKTAQSYHGHVYIDEYFWIGKFDELNKVASAMATHKKWRKTYF 300
           P  + +NGAEL +L TN  TAQS++G +Y+DE FWI  F +L KVAS MA+    R TYF
Sbjct: 223 PIVIGNNGAELIFLGTNSNTAQSHNGDLYVDEIFWIPNFQKLRKVASGMASQSHLRTTYF 282

Query: 301 STPSSKMHPAYSFWTGEKW-RGDKTTRKNIEFPTFDELRDGGRLCPDKQWRYVVTIEDAA 359
           STPS+  H AY FW+GE + RG     + ++     +   GG LC D QWR +VTIEDA 
Sbjct: 283 STPSTLAHGAYPFWSGELFNRGRSNRDERVDIDISHQALAGGMLCGDGQWRQIVTIEDAL 342

Query: 360 KGGCDLFDIEELREEYSETDFNNLFMCVFVDGASSIFEFNKIERCMVDS-DIWQDYKPNA 418
            GGC LF++++L++E S  DF NLFMC FVD  +S+F F +++RCMVD+ + W+D++P A
Sbjct: 343 AGGCTLFNLDQLKQENSADDFRNLFMCEFVDDKASVFPFEELQRCMVDAMEEWEDFEPFA 402

Query: 419 ARPFGSREVWLGYDPSRTRDNAVLMVVAPPIVAVEKFRVLEKHTWRGLSFQHQASEISKV 478
            RPF  R VW+GYDPS T D+A   V+APP+VA  KFR+LE+H W+G+ F  QA  I  +
Sbjct: 403 DRPFNWRPVWIGYDPSHTGDSAGCAVLAPPLVAGGKFRILERHQWKGMDFAAQAEAIRAL 462

Query: 479 FERFNVTYLGIDITGIGAGVHDLLVNKHPRETVAIHYSNENKNRLVMKMIDIIDGNRLQF 538
            E++ V Y+GID TGIG GV+ L+ +  P    AI Y+ E K  +V+K  D I    L++
Sbjct: 463 TEKYTVDYIGIDATGIGQGVYQLVRSFFPAAR-AIRYTPEMKTAMVLKAKDTIRRGCLEY 521

Query: 539 DAGMKETAMAFMAIKRVATNSGNMMTFKAERSEQAGHADDFWALSHALINEPLDHSTQRK 598
           DAG  +   +FMAI++  T+SG   T++A RSE+A HAD  WA  HAL+NEPL   +  +
Sbjct: 522 DAGATDITQSFMAIRKTMTSSGRSATYEASRSEEASHADIAWATMHALLNEPLSAGSGMQ 581

Query: 599 ST 600
           S+
Sbjct: 582 SS 583