Pairwise Alignments

Query, 605 a.a., terminase from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., oxidoreductase from Escherichia coli ECOR38

 Score =  347 bits (891), Expect = e-100
 Identities = 223/604 (36%), Positives = 317/604 (52%), Gaps = 60/604 (9%)

Query: 7   IRQAARALYLKAWTPREIADELNLNSDRIIYYWADKFGWRDMLREQTIDEAIANRIQTLL 66
           +RQ AR LY + + P EI+  + +N + I Y W  +  W +    Q + ++I  R+  L 
Sbjct: 7   VRQRARQLYWQGYPPAEISRLMGINPNTI-YAWKKRDQWDETPPVQRVTQSIDARLIQLT 65

Query: 67  EVENPSKPQLDMLDRLINHHVKLKKLRATEQPTQPNEAGTVSAQSGAHNSKSGSPKAESG 126
           E +N +      +D L     +LKK+                          G P A   
Sbjct: 66  EKQNKTGGDFKEIDLLTR---QLKKMH------------------------DGQPDA--- 95

Query: 127 TQTGDSGKQSAPSGKRKKVKNDVS--EITEADFKL-----WHDSLFAYQHTMRNNLHQRT 179
           T TG  G+        KK+KN  +  +I     K+     WH   +    T+      R 
Sbjct: 96  TATGKKGRA-------KKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRN 148

Query: 180 RNILKSRQIGATYYFAGEALEQAILTG------DNQIFLSASRAQADVFRRYIVAIAKEF 233
           R ILKSRQIGAT+YFA EAL  A+          NQIFLSASR QA  F+  I   A E 
Sbjct: 149 RMILKSRQIGATWYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAE- 207

Query: 234 LGIEITGNPST-LSNGAELHYLSTNGKTAQSYHGHVYIDEYFWIGKFDELNKVASAMATH 292
           + +E+ G     LSNGAELH+L T+  +AQSY G+ Y DE+FW+ +F EL KVA AMAT 
Sbjct: 208 VDVELKGGDKIILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATL 267

Query: 293 KKWRKTYFSTPSSKMHPAYSFWTGEKWRGDKTTRKNIEFPTFDELRDGGRLCPDKQWRYV 352
              R+TYFSTPS++ H AY++W G++W   K T K   F    +    G +CPD+ WR +
Sbjct: 268 SGLRRTYFSTPSTETHEAYAYWNGDRWNEKKATHKRQRFSVDWKTLHNGLICPDRTWRQI 327

Query: 353 VTIEDAAKGGCDLFDIEELREEYSETDFNNLFMCVFVDGASSIFEFNKIERCMVDS-DIW 411
           VT+ED    G    DI+E+R+E +E +F NL+MC FV    S F  N +  C VD  D W
Sbjct: 328 VTLEDVVNHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDW 387

Query: 412 QDYKPNAARPFGSREVWLGYD---PSRTRDNAVLMVVAPPIVAVEKFRVLEKHTWRGLSF 468
           +D+KP A RP G+R VW+GYD    S   D+  + VV PP V   +FR +E    +GL F
Sbjct: 388 KDWKPFAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPAVPGGRFRTVETRRVQGLEF 447

Query: 469 QHQASEISKVFERFNVTYLGIDIT-GIGAGVHDLLVNKHPRETVAIHYSNENKNRLVMKM 527
           + QA  I     R+NV ++GID+T G G  V+ ++    P   +   ++  +K  LV+KM
Sbjct: 448 EEQARVIEDFTYRYNVEHIGIDVTGGNGEAVYQIVKRFFP-AAIPYTFTLSSKRSLVLKM 506

Query: 528 IDIIDGNRLQFDAGMKETAMAFMAIKRVATNSGNMMTFKAERSEQAGHADDFWALSHALI 587
           + I+   R ++D   +E   AF A+++V T  G  +T++ +R+    H D  WA   A+I
Sbjct: 507 LQIMRAGRWEYDRAERELVAAFNAVRKVKT-PGGFITYETDRARGISHGDLAWATMLAVI 565

Query: 588 NEPL 591
           NEP+
Sbjct: 566 NEPI 569