Pairwise Alignments

Query, 299 a.a., capsid protein from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., GPO family capsid scaffolding protein from Pectobacterium carotovorum WPP14

 Score =  102 bits (255), Expect = 8e-27
 Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 3   KTSDWVIVATAGTTVSDGRVISESWINDMAELYDPEEYKALIWPEHYRSAWAVFEGKNWG 62
           K S W  V   G T  DGRVI  + I +MAE +DP  Y   I  EH +        + +G
Sbjct: 4   KVSKWFRVGVEGDTC-DGRVIDANDIQNMAETFDPRVYGCRINLEHLKGLLPDSPFRRYG 62

Query: 63  EVEELKA------GKFKDKLRLFAKLTPNHYLLEANKDGQKLFSSIEPEPDYKKEGRCYL 116
           +V ELKA         K KL LFAK+TP   L+  NK  QK+++S+E +P++   G+ YL
Sbjct: 63  DVVELKAETIDDDSALKGKLALFAKITPTDELVALNKASQKVYTSMEIQPNFANTGKAYL 122

Query: 117 LGLAVTDSPASSGTTRLRFS 136
           +GLAVTD PAS GT  L FS
Sbjct: 123 VGLAVTDDPASLGTEMLEFS 142