Pairwise Alignments

Query, 238 a.a., terminase from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., Phage small terminase subunit from Enterobacter asburiae PDN3

 Score = 62.4 bits (150), Expect = 8e-15
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 20/228 (8%)

Query: 4   SPAARHKLAVLATPAAAAHAAAAESLDSLHLRLVEFEQDKQVLKGFVQISEKVNHKRDVL 63
           SPAARH + V A+  A   A    +  +    LV+   D + LK       K + KR+ L
Sbjct: 3   SPAARHMMRVSASETAQRAAVPLRNATAFEQMLVKLAADNRTLKQIRSNERKADKKRE-L 61

Query: 64  IPKYKPLAEKYLAAGESYQNPIFTDLIVWLFDIGDLETAVEWLFKAIELNLPTPENFKRS 123
           +P Y P     L  G+  Q+ I   +++W  D  D+  A+E    A+   L  P    R 
Sbjct: 62  LPFYLPWVAGVLENGKGAQDDIVMTVMLWRLDADDIAGALEIARYAMTYGLTMPTG--RR 119

Query: 124 SWAVICADEVLKWAEQQLPNGHSIEPYFSRVFE--KIDKEWKLPEKLEAKWYKFAGYGLL 181
               + A+EV   A++ L     +E   S + +   + +   +P+ + AK +K  GY L 
Sbjct: 120 PTPYLLAEEVALAAQRLLAAKQPVE--LSNLLDTLALTERADMPDIVRAKLHKITGYVL- 176

Query: 182 MNEKGEPKPSSIGDLERLQKAKALLLTAHEKYNRIMVKTKIDQIDMRI 229
                        D ++L +A A L  A +  + I V+  I+Q++ ++
Sbjct: 177 ------------RDAKQLPEALAHLQRAIQLESTIGVRKDIEQLERQL 212