Pairwise Alignments

Query, 238 a.a., terminase from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Terminase, endonuclease subunit from Escherichia coli ECRC101

 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)

Query: 4   SPAARHKLAVLATPAAAAHAAAAESLDSLHLRLVEFEQDKQVLKGFVQISEKVNHKRDVL 63
           SPA RH + V A   A   AA           LV+   D++ LK       K   KR+ L
Sbjct: 3   SPAQRHMMRVSAAMTAQRDAAPLRHATVYEQMLVKLAADQRTLKAIYSKELKAAKKRE-L 61

Query: 64  IPKYKPLAEKYLAAGESYQNPIFTDLIVWLFDIGDLETAVEWLFKAIELNLPTPENFKRS 123
           +P + P     L  G+  Q+ I   +++W  D GD+  A+E    A++  L  P   +R+
Sbjct: 62  LPFWLPWVNGVLEQGKGAQDDILMTVMLWRLDTGDIAGALEIARYALKYGLTMPGKHRRT 121

Query: 124 SWAVICADEVLKWAEQQLPNGHSIEPYFSRVFEKIDKEWKLPEKLEAKWYKFAGYGLLMN 183
               +  +EV   A +    G S++         +     +P+++ AK +K    GL + 
Sbjct: 122 P-PYMFTEEVALAAMRAHAAGESVDTRLLTETLALTATADMPDEVRAKLHKIT--GLFLR 178

Query: 184 EKGEPKPSSIGDLERLQKAKAL 205
           + G+    + G L  LQ+A  L
Sbjct: 179 DAGD----AAGALAHLQRATQL 196