Pairwise Alignments

Query, 399 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., baseplate J/gp47 family protein from Erwinia tracheiphila SCR3

 Score =  291 bits (745), Expect = 2e-83
 Identities = 154/393 (39%), Positives = 227/393 (57%), Gaps = 9/393 (2%)

Query: 4   RPQADFVEILSESGVPVTEDAFEAALKADVTASGSLLSNDSQMSPFWRWVRAAVVTPAVW 63
           +P  D+  IL+E G+P T         A V   G L++N S MSPFWR + A ++TP +W
Sbjct: 5   KPTPDYESILAEQGMPTTATQIREEFNAVVREEG-LITNTSDMSPFWRLLTAMIITPVLW 63

Query: 64  MIRTLLAGHVMPNIFVGTAERWALELKAWEYNVTPKGAVSTQGLITFTKANAADETSIEA 123
           +   L++  VM N+F+ TA+   L+L AW  N+  K A S  G++ FTK     E ++  
Sbjct: 64  LKNALIST-VMSNLFLATAKGAFLDLFAWAVNLARKSATSAAGVVRFTKTETDREITVPL 122

Query: 124 GTIIQTPEIEGKVYKLTVIKTTVIKAGQASGKVLCEASEAGAAYNLPAGYFSILPQGVSG 183
           GT+IQT  I G +Y+L V     + AG AS  +   A   G+ +NL  GYF ILP  + G
Sbjct: 123 GTVIQTERINGIIYRLIVSSDVTLSAGIASASIPVVAELPGSGFNLAPGYFRILPVAIDG 182

Query: 184 IVSVTNEANWITQLGADQESDEELALRLQNAFTSAGEWHIDDVYRAMIASVAGIRSDNIF 243
           I S   E +W+T  GAD+E D++L  R++N +   G++H D VYR MIAS+AG+ +D I+
Sbjct: 183 IASAETENDWLTVPGADEELDDDLRDRIKNQYNLVGQYHTDAVYRGMIASIAGLNTDRIY 242

Query: 244 FENTGHITPGSANAYILMEVGATPQHVLDQLNKHIMQDGHHGHGDVLTCLAIPETQHSIS 303
           F+      PG+ N Y+L++ G   Q  +D +N ++M  G+HGHGD + CL +PET H ++
Sbjct: 243 FQYDAPRGPGTVNVYLLLDSGTASQQFIDTVNDYVMTQGNHGHGDDVLCLGMPETLHDLT 302

Query: 304 AQVVF--VANLDEMQKINELLEVENRIRAAFRETAAYPEMTRAKPESRFSISQLAHEIHS 361
             V     +NL + Q    L  + N IR AFRE   Y ++ +  P SRFS+S+L  EIH+
Sbjct: 303 VAVYLESASNLTDEQSATLLGNIGNMIRCAFRENTDY-DVAKTWPYSRFSVSRLGEEIHT 361

Query: 362 KMENVESVLIKVDGEPTDIISLLTQPRLQTLTV 394
              +V+S+   +     DI+S L  PRL +LTV
Sbjct: 362 AFSDVQSLEFSIG----DIVSDLNVPRLNSLTV 390