Pairwise Alignments

Query, 399 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., baseplate J/gp47 family protein from Dickeya dadantii 3937

 Score =  303 bits (777), Expect = 4e-87
 Identities = 171/399 (42%), Positives = 244/399 (61%), Gaps = 15/399 (3%)

Query: 1   MSKRPQADFVEILSESGVPVTEDAFEAALKADVTASGSLLSNDSQMSPFWRWVRAAVVTP 60
           M+++P+ D+ + L E+G+PVT +      +A VTASG L++N S+MSPFWR +   V TP
Sbjct: 1   MTEKPKIDYEQALKEAGMPVTAEKVTEQFQAQVTASG-LVTNTSRMSPFWRLISVMVTTP 59

Query: 61  AVWMIRTLLAGHVMPNIFVGTAERWALELKAWEYNVTPKGAVSTQGLITFTKANAADETS 120
            +W+ + +L   V+ N+++ TA    L L AW  N++ K A +  G+I F K++AA    
Sbjct: 60  VIWL-KDVLISVVLANMYLATASGSFLNLFAWGVNLSRKAATAASGVIRFYKSDAAQAVV 118

Query: 121 IEAGTIIQTPEIEGKVYKLTVIKTTVIKAGQASGKVLCEASEAGAAYNLPAGYFSILPQG 180
           I AGT+IQT  I G ++ L V   TVI AGQAS  V   A+  G A+NL  GY+ ILP G
Sbjct: 119 IPAGTLIQTERINGTIFSLAVSADTVITAGQASADVPVIATAEGGAFNLAPGYYRILPVG 178

Query: 181 VSGIVSVTNEANWITQLGADQESDEELALRLQNAFTSAGEWHIDDVYRAMIASVAGIRSD 240
           V+GI  V N+ +W+   GAD+ESD+EL  R +N F   G +H D VYR+MIA+VAG+  D
Sbjct: 179 VAGIERVENQEDWLLTPGADEESDDELRERCRNQFNLVGNYHTDAVYRSMIAAVAGLSID 238

Query: 241 NIFFENTGHITPGSANAYILMEVGATPQHVLDQLNKHIMQDGHHGHGDVLTCLAIPETQH 300
            IFF++     PG+ANAY+L++ G   Q  +D +N +I   G+HGHGD L C+A+PETQH
Sbjct: 239 RIFFQHDAPRGPGTANAYLLLDSGVVSQPFIDAVNDYITAQGYHGHGDDLRCVALPETQH 298

Query: 301 SISAQVVFVANLDEMQKINELLEV-----ENRIRAAFRETAAYPEMTRAKPESRFSISQL 355
            ++   V+V NL  M   +E L       ++ +R AFRE   Y ++ +  P SRFS S L
Sbjct: 299 DLTV-TVYVRNLVNM--TDEALAALRTGCQDLVRCAFRENTGY-DVEKTWPWSRFSFSTL 354

Query: 356 AHEIHSKMENVESVLIKVDGEPTDIISLLTQPRLQTLTV 394
           A E+H     + S    +D    DI+S L+ PRL +LTV
Sbjct: 355 AQELHDTFPLIAS----LDFSLGDIVSGLSVPRLASLTV 389