Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  468 bits (1203), Expect = e-136
 Identities = 245/378 (64%), Positives = 293/378 (77%), Gaps = 2/378 (0%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           M +NVNTNVSAMTAQRYLT AT    +SMERLSSG +INSAKDDAAGLQISNRL  QSRG
Sbjct: 1   MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L VA+RNANDGIS+AQTAEGAM E+T+ILQRMRDL+LQSANG+NS ++R A+ EE  AL 
Sbjct: 61  LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180
           DELNR+AETTSFGG KLLNG+F   SFQIG+ +GEA+++ +  +R+D+  MGG+++ A  
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180

Query: 181 GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE 240
            K K WGV     DL      K    V + I AK+GDDIEELATYINGQTD+ KASVD+E
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQE 240

Query: 241 GKLQLFTDNNRIDGAATFGGALAGELGI--GAAQDVTVDTLDVTTVGGAQESVAIVDAAL 298
           GKLQ+F     I+G     G LA ELG+  G     TV  +D+T+VGG+Q +V I+DAAL
Sbjct: 241 GKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDAAL 300

Query: 299 KYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQAS 358
           KYVDS RA+LGA QNR +H+I+NL NI ENV ASKSRIKDTDFAKETT LTK+QIL QA 
Sbjct: 301 KYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAG 360

Query: 359 SSVLAQAKQAPNSALALL 376
           +S+LAQAKQ PNSA++LL
Sbjct: 361 TSILAQAKQLPNSAISLL 378