Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

 Score =  171 bits (434), Expect = 2e-47
 Identities = 128/372 (34%), Positives = 180/372 (48%), Gaps = 90/372 (24%)

Query: 5   VNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVA 64
           + TN SA+ A     +++ A  ++MERLS+G +INSAKDDAAGL I++ +  Q +G+   
Sbjct: 4   IGTNSSALRATNASAASSKALSTAMERLSTGKRINSAKDDAAGLAIASSMTSQIKGMTQG 63

Query: 65  VRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELN 124
           +RNANDGIS+AQTAEGA+ E TN+LQRMR+L++Q+ N +N    +  I+ EI  L     
Sbjct: 64  IRNANDGISLAQTAEGALGEVTNMLQRMRELTVQAGNDTNDDTAKGNIKSEIDQL----- 118

Query: 125 RVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKDK 184
                                + QIG             + SD +  G K +  + G   
Sbjct: 119 ---------------------ATQIGK------------VLSDTSFNGIKLFDGSAGPAS 145

Query: 185 NWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKLQ 244
                              +G + I   A   D IE     +   TD+            
Sbjct: 146 -------------------DGKINIQAGANSSDAIEIDLGNVEDDTDV------------ 174

Query: 245 LFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSH 304
                     A    GA         A DVT  T DV    GA  ++ + D+ALK +D+ 
Sbjct: 175 ---------AAVVTAGATT------TALDVTAGTFDV----GA--ALDLYDSALKAIDTS 213

Query: 305 RAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQ 364
           RA LGA QNR    +N L     N+  +KSRI+D DF+ ETTAL KAQILSQAS+++LAQ
Sbjct: 214 RANLGAVQNRLESTVNTLTANVTNLTDAKSRIEDADFSTETTALAKAQILSQASTAMLAQ 273

Query: 365 AKQAPNSALALL 376
           A Q+  + + L+
Sbjct: 274 ANQSQQNVMKLI 285