Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

 Score =  176 bits (445), Expect = 1e-48
 Identities = 131/381 (34%), Positives = 192/381 (50%), Gaps = 32/381 (8%)

Query: 5   VNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVA 64
           + TN +A+ AQR + +AT AQ  + E+LS+G +INSAKDDAAG+ I+  +  Q RG+ VA
Sbjct: 4   IGTNSAALRAQRAIEAATKAQGQASEKLSTGKRINSAKDDAAGMAIAQTMTSQLRGMEVA 63

Query: 65  VRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELN 124
            RNA D IS+ QTAEG + E  N LQRMR+L+LQ+ANG N   DR A+Q E+     ++N
Sbjct: 64  KRNAADAISLTQTAEGILGEVQNSLQRMRELTLQAANGVNRPEDRAALQTEMDQTVAQIN 123

Query: 125 RVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKDK 184
            + + + F G  L + T            G A     +D  +D  L+    Y     +  
Sbjct: 124 ALLQNSEFNGVNLFSNT----------TQGTAA----RDYNADGDLLDYNGYGYYRDELM 169

Query: 185 NWGVEAGKTDLTITLKDKREGDVTISINA--KEGDDIEELAT--YINGQTDMIKASVDEE 240
           +    AG T + +        +V I++       DD   L T   +NG    +  S    
Sbjct: 170 H---SAGSTVINVQAGANATDNVAITLPTLRSNSDDFTLLGTDLAVNGTMRFVGIS---- 222

Query: 241 GKLQLFTDNNRIDGAATFGGALAGELG----IGAAQDVTVDTLDVTTVG-GAQESVAIVD 295
             + L  D + +  AA       G  G     G       D      +G  AQ+ +A++D
Sbjct: 223 -NIDLTLDYD-VGVAAVHRTNDLGSTGWMDPEGYVAFTDSDYKSYAQIGVTAQQGLAVID 280

Query: 296 AALKYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILS 355
           AAL  + + R  LGA Q+R     + LD    N+  ++SRI+D DF+ E+T L K+QILS
Sbjct: 281 AALAQISTARVNLGAAQSRLESISSQLDTNIVNLTDARSRIEDADFSTESTTLAKSQILS 340

Query: 356 QASSSVLAQAKQAPNSALALL 376
           QA++++LAQA       L LL
Sbjct: 341 QAATAMLAQANARQQDVLKLL 361