Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  172 bits (437), Expect = 8e-48
 Identities = 124/375 (33%), Positives = 178/375 (47%), Gaps = 84/375 (22%)

Query: 3   VNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLG 62
           ++++TN ++++ Q  L +      +SM RL +G++INSA DDAAGLQI+ R++ QSRG+ 
Sbjct: 2   LSLHTNYASLSTQNALGATQKTLTTSMSRLGTGFRINSAMDDAAGLQIATRMDAQSRGMA 61

Query: 63  VAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDE 122
           VA+RN  +GISM QTAEGA KE TNI+ RM+DL+ ++ANGS ++ DR A+Q E   L +E
Sbjct: 62  VAMRNTQNGISMMQTAEGAFKEMTNIVTRMKDLATEAANGSATQEDRDALQAEFDQLGEE 121

Query: 123 LNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGK 182
           L  +   +SF G  L N                      KD  +     G  T+Q     
Sbjct: 122 LGNIMTNSSFAGEALFN----------------------KDGTAGKLGAGAVTFQ----- 154

Query: 183 DKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEEL-ATYINGQTDMIKASVDEEG 241
                       +  T  +  E DVT ++ A  G D++ + A+Y  G T           
Sbjct: 155 ------------IGATTAETMEVDVTDAL-ADLGTDLDAVVASYTAGVT----------- 190

Query: 242 KLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYV 301
                        A T G  +A       A D   D LD                    +
Sbjct: 191 -------------AGTPGSEIAAAADANTAIDDLADVLDA-------------------I 218

Query: 302 DSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSV 361
            + RA+LGA  NR     NNL N     +ASK RI D D+A ET  +TK Q+L QAS+S+
Sbjct: 219 GAVRAQLGASSNRLESVYNNLGNQRTQTDASKGRIMDVDYAAETANMTKNQMLLQASTSM 278

Query: 362 LAQAKQAPNSALALL 376
           L Q+       ++L+
Sbjct: 279 LKQSSSMSQLVMSLM 293