Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., FliC/FljB family flagellin from Erwinia tracheiphila SCR3

 Score =  201 bits (510), Expect = 4e-56
 Identities = 143/434 (32%), Positives = 222/434 (51%), Gaps = 67/434 (15%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA  +NTN  ++  Q  +    +A  SS+ERLSSG +I SAK DAAG  I+NR      G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRITSAKADAAGQAIANRFTSNING 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L  A RNANDGIS AQT EGA+ E  N LQR+R+L++Q+ NG+NS +D  +IQ+EI +  
Sbjct: 61  LTQASRNANDGISAAQTTEGALSEINNNLQRVRELTVQAQNGTNSDSDLTSIQDEIKSRL 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180
           DE++RV+  T F G  +L     T   Q+G+++GE + ++++  + D++ +G K +    
Sbjct: 121 DEIDRVSGQTQFNGVNVL-AKDGTMKIQVGSNDGETISIDLQ--KIDSSTLGLKGFSV-- 175

Query: 181 GKDKN----------WGVEAGKTDLTITLKDKREG----DVTISINAKEGDDIEELATY- 225
             DKN           G  A  T  T+ L     G       +S+++      +  +TY 
Sbjct: 176 --DKNALSLGDSITQVGSAASGTMSTVDLSAVASGLGMAASGLSLHSVLDSSGKATSTYV 233

Query: 226 INGQTDMIKASVDEEGKLQLFTDNNRIDGAATFGGALAGEL---GIGAAQDVTVDTLDVT 282
           ++  +D    SV   GK++L  +   +D + +  G  +G +    I    D + + +   
Sbjct: 234 VSSGSDNYSVSVGSSGKVEL--NKTEVDYSDSTNGVTSGVMTGQAIKVGADASGNAVGFV 291

Query: 283 TVGGAQESV----------------------------------------AIVDAALKYVD 302
           TV G + +V                                        A++D A+  +D
Sbjct: 292 TVQGKEYTVASSGIANGGDTATSGSSNINDIANTGNTSLYTGTSTSDPLALLDKAIAQID 351

Query: 303 SHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVL 362
             R+ LGA QNR + AI NL N   N++ ++SRI+D D+A E + ++KAQI+ QA +SVL
Sbjct: 352 KFRSSLGAVQNRLDSAITNLSNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVL 411

Query: 363 AQAKQAPNSALALL 376
           A+A Q P   L+LL
Sbjct: 412 AKANQVPQQVLSLL 425